User: first

gravatar for first
first20
Reputation:
20
Status:
New User
Location:
Last seen:
2 hours ago
Joined:
3 months, 2 weeks ago
Email:
f**********************@gmail.com

Posts by first

<prev • 6 results • page 1 of 1 • next >
6
votes
2
answers
140
views
2
answers
Data changes between reference assemblies
... Was there a change in the reference allele and/or alternate allele for a snp which occurred when a new reference assembly was released or even between builds (e.g. the reference allele in the previous assembly is now the alternative allele in the new assembly)? I am asking specifically for changes f ...
genome assembly written 9 days ago by first20 • updated 8 days ago by Emily_Ensembl16k
4
votes
1
answer
160
views
1
answer
Genotypes from different strand for same variant position
... In terms of genotypes and strand information, would a sample genotype AG be equivalent to GA? And would genotype AG be equivalent to CT or TC for the same variant position? ...
genotype strand written 5 weeks ago by first20 • updated 5 weeks ago by finswimmer8.9k
0
votes
1
answer
197
views
1
answers
Comment: C: Why do genes have multiple consequences for the same SNP?
... Unfortunately I do not have any information on the processing of the data. But what I'm asking is whether the actual transcript or RNA of an individual is actually identified, like how genotypes of individuals are indentified, or the transcript data is just queried and filtered from a database. ...
written 3 months ago by first20
0
votes
1
answer
197
views
1
answers
Comment: C: Why do genes have multiple consequences for the same SNP?
... So, I suspect the latter but are transcripts actually identified from the sample much like genotypes are or simply based on the filters set by the researcher? ...
written 3 months ago by first20
0
votes
1
answer
197
views
1
answers
Comment: C: Why do genes have multiple consequences for the same SNP?
... Hi! Thanks for the information. I have actually come across the concept of transcripts and RNA's a while ago. It actually made me wonder why such important information is not included in the data I received. ...
written 3 months ago by first20
8
votes
1
answer
197
views
1
answer
Why do genes have multiple consequences for the same SNP?
... I am an IT guy developing a database for genotype data of samples and I am confused when I look up a snp in NCBI, the genes listed for that SNP sometimes have multiple consequences (intron, missense, upstream, etc.) but on the data that I received only one of those consequences is listed. ...
gene snp written 3 months ago by first20

Latest awards to first

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1238 users visited in the last hour