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155
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RNA seq analysis in R
R pca heatmap
updated 2 days ago by ★ 18k • written 2 days ago by ▴ 140
2
votes
4
replies
279
views
Convert ensembl ids to gene names
R mus musculus
3 days ago by anasjamshed ▴ 140
0
votes
0
replies
210
views
Skilled occupation list austrlia
Australia
4 weeks ago by anasjamshed ▴ 140
0
votes
0
replies
219
views
MS(CSIT) VS MS(DS)
computer-science career data-science
updated 9 weeks ago by 44k • written 9 weeks ago by ▴ 140
3
votes
3
replies
818
views
Identify SNPs with Fst estimates > 0.9 and annotate them
snpeff fst SNP
updated 12 weeks ago by 164k • written 19 months ago by ▴ 140
3
votes
6
replies
774
views
Problem in getting geo file through GEOQUERY
geoquery Geo
updated 6 months ago by 44k • written 6 months ago by ▴ 140
1
vote
5
replies
749
views
DYH17 Structure Prediction
BLAST Protein-Structure-Prediction
7 months ago by anasjamshed ▴ 140
2
votes
1
reply
425
views
Pediococcus acidilactici sequence analysis
BLAST Gene-Ontology
updated 7 months ago by 44k • written 7 months ago by ▴ 140
0
votes
0
replies
340
views
Interpret mean variance trend plot
R voom
10 months ago by anasjamshed ▴ 140
16
votes
29
replies
3.0k
views
Gene labels problem in enhanced volcano
R ggplot2 enhancedvolcano
updated 10 months ago by ★ 28k • written 10 months ago by ▴ 140
1
vote
4
replies
519
views
Absolute logfc and Pvalue for statistical calculation
volcano-plot logfc
updated 10 months ago by 44k • written 10 months ago by ▴ 140
5
votes
5
replies
823
views
Example MAF Files
MAF
updated 11 months ago by 44k • written 11 months ago by ▴ 140
0
votes
2
replies
539
views
Combine GEO ids
NCBI Geo
updated 9 months ago by 44k • written 12 months ago by ▴ 140
1
vote
4
replies
675
views
Analyze with Geo2R
R NCBI
12 months ago by anasjamshed ▴ 140
6
votes
1
reply
551
views
16S vs shotgun tools
metagenomics
16 months ago by anasjamshed ▴ 140
5
votes
5
replies
1.1k
views
How to check the quality of fasta file
fastqc fasta
updated 16 months ago by 85k • written 16 months ago by ▴ 140
2
votes
5
replies
819
views
kraken in windows
kraken
updated 16 months ago by 44k • written 16 months ago by ▴ 140
3
votes
3
replies
735
views
scrna pipeline
scRNA-seq
updated 16 months ago by ▴ 140 • written 16 months ago by ▴ 140
4
votes
14
replies
2.8k
views
RSEM implementation
RSEM
updated 17 months ago by 44k • written 18 months ago by ▴ 140
2
votes
5
replies
1.2k
views
vcftools on 2 snpeff vcf files
snpeff vcftools
updated 17 months ago by 44k • written 19 months ago by ▴ 140
1
vote
3
replies
898
views
SnpEff eff Error
SnpEff Galaxy
updated 19 months ago by ★ 2.4k • written 19 months ago by ▴ 140
2
votes
3
replies
691
views
Variants that are different between the clown and control
Difference VCF
updated 19 months ago by 148k • written 19 months ago by ▴ 140
1
vote
3
replies
787
views
Error while running GATK4 Mutect2 in Galaxy
Mutect2 GATK4
updated 19 months ago by 164k • written 19 months ago by ▴ 140
3
votes
5
replies
1.1k
views
Reference genome of python molurus bivittatus
bivittatus python molurus
updated 19 months ago by 148k • written 19 months ago by ▴ 140
1
vote
1
reply
1.4k
views
Installing pybedtools in Windows 10
pybedtools
updated 19 months ago by 20k • written 19 months ago by ▴ 140
2
votes
6
replies
1.1k
views
problem with bedtools getfasta
getfasta bedtools
19 months ago by anasjamshed ▴ 140
2
votes
3
replies
792
views
Problem while executing bedtools sort
genome bedtools
updated 20 months ago by 44k • written 20 months ago by ▴ 140
1
vote
3
replies
1.3k
views
Is it possible to draw volcano plot without p values
p-value log2fold plot
updated 20 months ago by 44k • written 20 months ago by ▴ 140
0
votes
4
replies
879
views
Problem in retrieving geo data sets
geo
20 months ago by anasjamshed ▴ 140
3
votes
6
replies
1.3k
views
Pig Reference Genome
Genome
updated 20 months ago by 21k • written 20 months ago by ▴ 140
0
votes
0
replies
476
views
MethylR on bam files Gives Error
MethylR bismark
20 months ago by anasjamshed ▴ 140
2
votes
8
replies
1.7k
views
Use bismark files to run methylKit
bismark R
21 months ago by anasjamshed ▴ 140
2
votes
2
replies
3.3k
views
bcftools annotate -a
bcftools VCF
updated 17 months ago by 44k • written 21 months ago by ▴ 140
0
votes
2
replies
760
views
Analyze 2 or 3 different datasets from GEO2R
Microarray GEO
21 months ago by anasjamshed ▴ 140
1
vote
9
replies
1.6k
views
Split trio vcf file
bcftools VCF
updated 21 months ago by 44k • written 21 months ago by ▴ 140
0
votes
13
replies
2.0k
views
Use bcftools isec to find denovo mutations
mutations denovo
updated 21 months ago by 44k • written 21 months ago by ▴ 140
0
votes
0
replies
519
views
Seperate males and females samples from trio.vcf
vcf shell
21 months ago by anasjamshed ▴ 140
19
votes
11
replies
3.2k
views
Unable to Create Index file of VCF
VCF
updated 3 months ago by 148k • written 22 months ago by ▴ 140
1
vote
9
replies
1.9k
views
Obtaining bcf and vcf files and use bcf tool annotate
bcftools
updated 21 months ago by 44k • written 22 months ago by ▴ 140
2
votes
6
replies
1.7k
views
Design and Contrast Matrix in Limma Analysis
R
updated 22 months ago by 5.0k • written 22 months ago by ▴ 140
0
votes
6
replies
1.1k
views
expression of the GAT1 transport protein
protein GEO gene
updated 21 months ago by 44k • written 22 months ago by ▴ 140
10
votes
7
replies
1.7k
views
Use tximport to merge and transform the transcript counts to gene counts
RNAseq gene
updated 23 months ago by 44k • written 23 months ago by ▴ 140
1
vote
12
replies
1.8k
views
Disease information from gene names
Genes Disease
23 months ago by anasjamshed ▴ 140
0
votes
5
replies
1.2k
views
Create phylogenetic tree of 144 species
phylogenetic-tree
updated 22 months ago by 44k • written 23 months ago by ▴ 140
0
votes
5
replies
1.3k
views
How to create bigwig file in galaxy after MACS procedure(Chip Seq)
ChIP-Seq Galaxy
updated 24 months ago by 44k • written 24 months ago by ▴ 140
0
votes
0
replies
435
views
Problem in visulaizing peak files in IGB(Windows)
IGB Galaxy
24 months ago by anasjamshed ▴ 140
12
votes
25
replies
3.1k
views
Transform Data into DNA picture
DNA
updated 24 months ago by 47k • written 2.0 years ago by ▴ 140
0
votes
3
replies
650
views
Difference between RNA Seq and Microarray
microarray RNA-seq
updated 2.0 years ago by 44k • written 2.0 years ago by ▴ 140
1
vote
3
replies
772
views
Blast Variations
blast
updated 2.0 years ago by 44k • written 2.1 years ago by ▴ 140
2
votes
2
replies
823
views
How to generate pathway analysis report for a list of proteins
python R
updated 2.0 years ago by 44k • written 2.1 years ago by ▴ 140
128 results • Page 1 of 3
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