User: ali.hakimzadeh

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Posts by ali.hakimzadeh

<prev • 17 results • page 1 of 2 • next >
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Comment: C: analyze and compare PValues in 2 csv file by python
... thanks anyway. i didn't mean anything by "!". pardon me if you i irritate you by that. ...
written 5 days ago by ali.hakimzadeh0
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Comment: C: analyze and compare PValues in 2 csv file by python
... i saw the suggestions are toward pandas but i couldn't adopt what i want in the exercise by pandas but as it seems the only solution is to do it! the code is just to show what i use to create for my tables! that is it! ...
written 5 days ago by ali.hakimzadeh0
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Comment: C: analyze and compare PValues in 2 csv file by python
... the problem is i am not a R programmer and i am not into that! i just use this package because i am stimulating an article process! that is also why i want to compare two tables which is mine and them! ...
written 5 days ago by ali.hakimzadeh0
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analyze and compare PValues in 2 csv file by python
... Hi all, I am doing an RNA-seq analysis. I have two CSV files, and I want to get a set of data of my genes during P Values to know which genes in each CSV file are up regulated. EdgeR achieves the tables in differential gene expression in R studio, and the script is written down. I use the codes f ...
python csv rna-seq written 5 days ago by ali.hakimzadeh0
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Comment: C: Up/Down regulated genes list in EdgeR
... thank you so much i get what i want and sorry for delay in response ;) ...
written 6 days ago by ali.hakimzadeh0
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Comment: C: Up/Down regulated genes list in EdgeR
... yeah exactly I just get the numbers, here is what I get in R studio : [down][1] [1]: https://ibb.co/BBMbVcf ...
written 13 days ago by ali.hakimzadeh0
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Comment: C: Up/Down regulated genes list in EdgeR
... I removed the gene names from the first column since it gets me an error while I try to operate read.csv on my file. I can put them back to the file, but as I told you I get an error! ...
written 13 days ago by ali.hakimzadeh0
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Comment: C: Up/Down regulated genes list in EdgeR
... yes here is the pic of my "CSV" file! [Table_50_ID.csv][1] [1]: https://ibb.co/jDJvfHr ...
written 13 days ago by ali.hakimzadeh0
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Comment: C: Up/Down regulated genes list in EdgeR
... Thanks for your reply, [SMK][1] But it doesn't give me the output! It shows in R studio in Values part. If I want to mention my CSV file constructed from just counts and sample names that the first row belongs to the sample names and the others are counts of genes belong to them. can it be the probl ...
written 13 days ago by ali.hakimzadeh0
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Up/Down regulated genes list in EdgeR
... Hi All, I am doing differential gene expression analysis on "Edge R". I have to stimulate an article procedure which is > (Differential gene expression was done using edgeR and using a > generalized linear model (GLM). DE genes were identified using a log2 > fold change, and likelihood ...

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