User: giegie

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giegie0
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Posts by giegie

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Comment: C: Cell surface markers list
... in this datasets, it seems like all markers are combined together and they don't have a separate table with cell surface markers only. I see eg. TF being mixed with membrane proteins. ...
written 21 days ago by giegie0
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Cell surface markers list
... I am working on my single-cell RNA-seq data and I would like to select only fro genes that are cell surface markers. Do you know where can I find a full list of cell surface markers? ...
rna-seq written 22 days ago by giegie0 • updated 22 days ago by genomax87k
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Generate many plots at once in R
... I have a function which generates a plot: function(x, y,"name") I would like to generate as many plots as "names" present in character z z [1] "Bzw1" "Dnajc1" "Ppig" "Prex1" "Dpm1" "Prpf38b" [7] "Snrnp70" "Spty2d1" "Cbl" ...
R written 3 months ago by giegie0 • updated 3 months ago by zx87549.4k
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Comment: C: How do I replace the values in one file with the values in another file?
... Not sure why, but the code creates an empty output :( Thank you for your effort, I would be really glad if you could try to correct it. The files are the outputs of the HiC-Pro pipeline, I am using these files for downstream analysis of HiChIP data. ...
written 21 months ago by giegie0
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Comment: C: How do I replace the values in one file with the values in another file?
... The files are outputs of HiC-Pro pipeline that generates intra- and inter-chromosomal contact maps. ...
written 21 months ago by giegie0
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How do I replace the values in one file with the values in another file?
... I have 2 tab-separated files which look like this: **file1.txt** chr1 710000 715000 143 chr1 715000 720000 144 chr1 720000 725000 145 chr1 725000 730000 146 chr1 730000 735000 147 chr1 735000 740000 148 chr1 740000 745000 149 chr1 ...
hic written 21 months ago by giegie0 • updated 21 months ago by JC11k

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