User: uagrif

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uagrif10
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7 months, 1 week ago
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7 months, 3 weeks ago
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Posts by uagrif

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Comment: C: CWL: How to return int or string[] from CommandLineTool?
... Thank you Michael, that works! Here is sample code without InlineJavascriptRequirement: #!/usr/bin/env cwl-runner class: CommandLineTool cwlVersion: "v1.0" baseCommand: [echo, "{\"value\": 42}"] # redirect stdout into file with predefined name stdout: cwl.output.j ...
written 7 months ago by uagrif10
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Comment: C: CWL: How to return int or string[] from CommandLineTool?
... Hello Michael, Thanks for replying! I've tried your code sample but 42 is still read as string. (cwl-runner) root@28d532f49b21:~/cwl/complex-out# cwl-runner complex.cwl /root/python-dfab/cwl-runner/bin/cwl-runner 1.0.20181102182747 Resolved 'complex.cwl' to 'file:///root/cwl/complex-o ...
written 7 months ago by uagrif10
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CWL: How to return int or string[] from CommandLineTool?
... Hello guys, I'm experimenting with scatter/gather feature of [Common Workflow Language][1] and I have troubles with return type that differs from string. So, returning strings works good: class: CommandLineTool cwlVersion: "v1.0" baseCommand: [bash, -c, "echo 42 > data.txt"] i ...
cwl written 7 months ago by uagrif10 • updated 7 months ago by Michael R. Crusoe1.5k

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