User: vitor.eca

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vitor.eca0
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Posts by vitor.eca

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From where should I retrieve the reference genomes of human microbiota?
... Hi, Does anyone know if there is an updated page from where I can easily retrieve the curated reference genomes of human microbiota, I think it´s possible to do that from HMREFG page of NIH Human Microbiome Project, however, it is based on GenBank 11/2009. Thank´s in advance. ...
assembly written 5 days ago by vitor.eca0
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Comment: C: How to obtain only one target sequence for each query read using blast+?
... Thanks lieven.sterck :) ...
written 14 days ago by vitor.eca0
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How to obtain only one target sequence for each query read using blast+?
... Hi, I´m using blast+ (blastn) to do a local blast with a database I´ve downloaded. As a result I would like to have only one hit per each read I have, so, I´m using the option "max_target_seqs 1", it happens that sometimes I get more than one hit for each of my query sequences, for what I understand ...
assembly written 14 days ago by vitor.eca0 • updated 14 days ago by h.mon21k

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