User: anjuraas

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anjuraas10
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Posts by anjuraas

<prev • 37 results • page 1 of 4 • next >
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Comment: C: error in deseq2
... I ran these same dataset before. that time I got the results. only difference is, now I am using latest version of gff file from ncbi. ...
written 16 days ago by anjuraas10
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Comment: C: error in deseq2
... ![this is my feature count table which I used as input for deseq2. I am not able to find the mistake in this.][1] https://ibb.co/mvk0jCP` ` ...
written 16 days ago by anjuraas10
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Comment: C: error in deseq2
... I cant fine anything wrong in featureCount input file. If I give header it is showing duplicate row names are allowed and if I supress the header it is showing the above said error. ...
written 17 days ago by anjuraas10
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Comment: C: error in deseq2
... I took my dataset from SRA and used bowtie for illumina for alignment and used featureCount for count table. I downloaded gff file and fna file from ncbi. ...
written 18 days ago by anjuraas10
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Comment: C: error in deseq2
... I put supress the header option true. ...
written 18 days ago by anjuraas10
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error in deseq2
... hi I am getting error while running deseq2 in usegalaxy. This is the error: > Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec, : line 2 did not have 14 elements Calls: get_deseq_dataset ... DESeqDataSetFromHTSeqCount -> lapply -> lapply -> FUN -> read ...
deseq2 mirna written 18 days ago by anjuraas10
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Comment: C: circular DNA identification
... thank you archana.bioinfo87 ...
written 8 weeks ago by anjuraas10
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Comment: C: circular DNA identification
... thanks for your reply. I need already available datasets for downloading. is there any specific types like RNA-seq for circular RNA,available in SRA? ...
written 8 weeks ago by anjuraas10
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circular DNA identification
... hi I want to study circular RNAs present in gastric cancer. I saw in Wikipedia that I cant go for normal RNA-seq for circular RNA discovery as circular RNAs are non-polyadenylated. what kind of dataset I can go for and from which database? Please help ...
rna -seq circular rna written 8 weeks ago by anjuraas10 • updated 8 weeks ago by archana.bioinfo87160
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Comment: C: target gene selection for miRNA
... thank you for your reply. ...
written 8 months ago by anjuraas10

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