User: anjuraas

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anjuraas10
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3 months, 2 weeks ago
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5 months, 1 week ago
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Posts by anjuraas

<prev • 28 results • page 1 of 3 • next >
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Comment: C: target gene selection for miRNA
... thank you for your reply. ...
written 3 months ago by anjuraas10
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Comment: C: target gene selection for miRNA
... it is miRNA.and I want to know the target genes of these miRNAs. ...
written 3 months ago by anjuraas10
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Comment: C: target gene selection for miRNA
... only Cumulative weighted context++ score and total context++ score is present in targetscan result.so what can I do? ...
written 3 months ago by anjuraas10
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target gene selection for miRNA
... hi I have a list of differentially expressed genes. i used targetscan for finding the target genes. As I have to work on miRNA: mRNA interaction in gastric cancer I have to select target genes related to that. How can I narrow down my target genes? thank you ...
target genes mirna written 3 months ago by anjuraas10
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Comment: C: miRNA mRNA interaction studies
... I used NCBI humane reference genome.in that gene identifier is ID. ...
written 4 months ago by anjuraas10
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Comment: C: miRNA mRNA interaction studies
... ok.let me try this.thank you ...
written 4 months ago by anjuraas10
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Comment: C: miRNA mRNA interaction studies
... Thank you for your reply.I have one more doubt,after doing deseq2 I got the results.but gene ids are given in the table.how can I know the gene names from that?should I search that manually in ncbi(there is nearly 1500 gene ids),or is there any tools for that? ...
written 4 months ago by anjuraas10
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Comment: C: miRNA mRNA interaction studies
... I am doing differential expression analysis using miRNA seq in gastric cancer.i am using 3 sets,control,adjacent,tumor.i have got the deseq2 results.using the miRNAs I want to study angiogenesis is gastric cancer. ...
written 4 months ago by anjuraas10
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miRNA mRNA interaction studies
... hi I want to study miRNA-mRNA interaction in gastric cancer. I downloaded the datasets from SRA and did differential expression using DESEQ2.My pipeline was Bowtie>featurecounts>deseq2. I used NCBI human reference genome file and annotation file. I worked till this using galaxy.Here after I do ...
mrna interaction deseq2 mirna written 4 months ago by anjuraas10
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(Closed) Galaxy is down
... After the maintenance works galaxy is completely slow. I want to run my bowtie from past 3 days, still its showing 'this job is waiting to run'. Why it is down? Can you please correct that soon?? ...
results bowtie too slow written 4 months ago by anjuraas10

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