User: alexandramirandaaa

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Posts by alexandramirandaaa

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Comment: C: Criteria for Overlapping SNPs
... So as to interpret your answer. When two SNPs doesn't have the same Chromosome Position even if the involved allele are the same, they still don't overlap? Okay, got it. Thank you so much!!! ...
written 3 months ago by alexandramirandaaa0
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Comment: C: Criteria for Overlapping SNPs
... I have the data of SNPs of Alzheimer's Disease and what's included is Chromosome, Position, Marker Name, Effect Allele, Non-Effect Allele. I found this data from IGAP. And I also have the data of SNPs of Testosterone/Estradiol which includes Chromosome, Position, Marker Name, Major Allele, Minor A ...
written 3 months ago by alexandramirandaaa0
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Criteria for Overlapping SNPs
... Hello. Need help again. What needs to be considered for one to say that it is an overlapping SNPs? I mean, should the Chromosome Number, Position, Marker Name, Major and Minor Allele, etc. be the same? Or as long as the Chromosome Number and Marker Name are the same, it is already an overlapping SNP ...
snp written 3 months ago by alexandramirandaaa0 • updated 3 months ago by WouterDeCoster36k
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Comment: C: Overlapping SNPs in R
... Hello, I've tried doing it but I don't understand the IRanges. Is that the position number? Because the position number only gives 1 numerical value. Thank you so much! ...
written 3 months ago by alexandramirandaaa0
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Comment: C: Overlapping SNPs in R
... Hello, yes I also have the file now for the testosterone and estradiol with Chromosome Number, Position, Marker Name, Major Allele, Minor Allele and Pvalue . ...
written 3 months ago by alexandramirandaaa0
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Comment: C: Overlapping SNPs in R
... Hello, thanks for your response. I had this data from AD patients that is in .txt format which includes the Chromosome Number, Position, Marker Name, Affected Allele, Non-Affected Allele, Beta, Standard Error, and Pvalue. I apologize because I'm just a beginner in using R so I am clueless on what ...
written 3 months ago by alexandramirandaaa0
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Comment: C: Overlapping SNPs in R
... Hello, thanks for your response. I had this data from AD patients that is in .txt format which includes the Chromosome Number, Position, Marker Name, Affected Allele, Non-Affected Allele, Beta, Standard Error, and Pvalue. I apologize because I'm just a beginner in using R so I am clueless on what ...
written 3 months ago by alexandramirandaaa0
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Overlapping SNPs in R
... Hello, I need help in my Bioinformatics Project which is due in 4 days. I'm trying to see the overlapping SNPs of Alzheimer's Disease and Sex Hormones in R. But I can't seem to find a code that can show it. Anyone who knows how to do it and the codes for that? THANK YOU SO MUCH!!! ...
R snp homework written 3 months ago by alexandramirandaaa0 • updated 3 months ago by Jeremy Leipzig18k

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