User: ana.agapito.v

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plink produces does pruning according to log file but prune.in is full of dots
... Hi, I'm running a big SNP database (160GB vcf file) I pruned with *plink*; plink --vcf SNPs_clean1.vcf --allow-extra-chr --indep-pairwise 50 10 0.1 --out SNP_50_10_01 It starts running producing the temporary files and the output files (prune.in and prune.out). In the log file it shows having ...
snp plink genome software error written 10 months ago by ana.agapito.v20 • updated 6 months ago by cicindel10

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