User: ana.agapito.v

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plink produces does pruning according to log file but prune.in is full of dots
... Hi, I'm running a big SNP database (160GB vcf file) I pruned with *plink*; plink --vcf SNPs_clean1.vcf --allow-extra-chr --indep-pairwise 50 10 0.1 --out SNP_50_10_01 It starts running producing the temporary files and the output files (prune.in and prune.out). In the log file it shows having ...
snp plink genome software error written 4 months ago by ana.agapito.v10 • updated 12 days ago by cicindel0

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