User: meizi2015

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meizi201520
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5 months ago
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Posts by meizi2015

<prev • 5 results • page 1 of 1 • next >
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Comment: C: How to export CNVkit results into PyClone?
... Hi Eric, i have the same question with you. I have download the WES data and used mutect2 to call somatic mutations and CNVkit to call CNV. But i really don't know how can i create the tsv file for pyclone. If you have solved this problem, please teach me how to do. Thank you. ...
written 3 months ago by meizi201520
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Comment: C: Nextera Rapid Capture Exome Regions hg38
... I can do convert to hg38 only if there is GRch38, but i only find GRCh37/hg19. ...
written 3 months ago by meizi201520
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Comment: A: Nextera Rapid Capture Exome Regions hg38
... Hi, did you find the hg38 exome targeted regions? ...
written 4 months ago by meizi201520
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Comment: C: a question about fishplot
... Yes, I think i understand the example and i set my own timepoint, matrix and parents. The problem is that i can't get a roundish cruve in my picture. In timepoint 3 there is alaways a sunken and i don't know why. ...
written 5 months ago by meizi201520
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a question about fishplot
... Hello All, I want to use fishplot in R to draw a model picture like this: https://ibb.co/h7WtX0 Here is my code: library(fishplot) timepoints=c(0,1,5,10) frac.table=matrix(c(2,0,0,3,1,0,50,40,2,90,75,30),ncol = length(timepoints)) parents = c(0,1,2) fish = c ...
fishplot R written 5 months ago by meizi201520 • updated 5 months ago by Chris Miller20k

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