User: bioinformatica2005

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Posts by bioinformatica2005

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Comment: C: Meaning Of The Initial Column Of Filtered Out By Vcfutils.Pl Varfilter -P
... Good explanation although it is still not clear the meaning of the tags "U", "M" and "S" (if they really exist). "M" = "MAPQ bias"?. I had already queried the documentation of samtools you cite and made varFilter -h but I do not see the answer there. Thank you so much for your time, ashutoshmits. ...
written 4.6 years ago by bioinformatica20050
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Meaning Of The Initial Column Of Filtered Out By Vcfutils.Pl Varfilter -P
... Hello all, Which are the possible values and meanings of the first column in the output (STDERR) of the variants that are obtained when the option '-p' is used in: vcfutils.pl varFilter -p [file_with_the_filtered_out_variants] ? An example of this output (4 rejected variants, with field-1 values ...
samtools mpileup written 4.6 years ago by bioinformatica20050 • updated 8 months ago by Biostar ♦♦ 20

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