User: somayeh bakhshalizadeh

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30
Status:
New User
Location:
Iran
Last seen:
4 months, 3 weeks ago
Joined:
1 year ago
Email:
s**********@yahoo.com

Posts by somayeh bakhshalizadeh

<prev • 18 results • page 1 of 2 • next >
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Which of the R packages is better suited for estimating the GWAS meta-analysis "random effects model"?
... Hi, Does anyone know the best package for estimating the random effects model? Best Regards ...
random effects model written 5 months ago by somayeh bakhshalizadeh30 • updated 3 months ago by Biostar ♦♦ 20
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How can I draw gating networks using the Cytoscape software for meta-analysis of GWAS data? Can anyone help me?
... Hello, To create genetic networks in 24 studies, I have different genes for each study and have rsSNP, P-value, SE, Beta, MAF values and ...: like this: In the first study: rsSNP N Position Beta SE P-value Gene Name MAF And the rest of the stu ...
gene written 8 months ago by somayeh bakhshalizadeh30
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Comment: C: Is the dbSNP site filtered?
... Thank you for your guide. ...
written 10 months ago by somayeh bakhshalizadeh30
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Comment: C: Is the dbSNP site filtered?
... Yes I am an Iranian, this site was working before. But now it's a problem. Whether it is updated? ...
written 10 months ago by somayeh bakhshalizadeh30
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Is the dbSNP site filtered?
... Hello friends. Is the dbSNP site (http://www.bioinfo.org.cn/relative/dbSNP%20Home%20Page.htm) filtered? It does not work for me. ...
snp written 10 months ago by somayeh bakhshalizadeh30
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Comment: C: How can I convert -log10 (p-value) to p-value?
... Thank you so much for your reply. ...
written 11 months ago by somayeh bakhshalizadeh30
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Comment: C: How can I convert -log10 (p-value) to p-value?
... Thank you for your reply, Here: logp<- -log10(p) # = 2 What does the number 2 mean? ...
written 11 months ago by somayeh bakhshalizadeh30
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How can I convert -log10 (p-value) to p-value?
... Hello, Example: –log10 (p-value)= 11.28 p-value??? Can anyone help? Thanks in advance. Best regards, ...
p-value written 11 months ago by somayeh bakhshalizadeh30 • updated 11 months ago by dariober10k
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Comment: C: Genome wide association studies (GWAS) Meta-analysis
... In my first study, I have these BTAs: exp(1): 2.718282, exp(3):20.08554, exp(5): 148.4132, exp(8):2980.958, exp(9):8103.084, exp(11):59874.14, exp(14):1202604, exp(18):65659969, exp(19): 178482301, exp (21):1318815734, exp(23):9744803446 Ranged from 2.72 to 9744803446. ...
written 12 months ago by somayeh bakhshalizadeh30
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Comment: C: Genome wide association studies (GWAS) Meta-analysis
... Hello, Thank you so much for your reply, For example: (SNP name: rs41646593, **BTA:1**, Position (bp): 2515412, Gene name:MIS18A) Here BTA = 1, as you said: Can you confirm what is the BTA column in your data? - this is likely the **beta coefficient**. If you obtain the exponent of this, then ...
written 12 months ago by somayeh bakhshalizadeh30

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