User: somayeh bakhshalizadeh

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50
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New User
Location:
Iran
Last seen:
10 months ago
Joined:
2 years ago
Email:
s**********@yahoo.com

Posts by somayeh bakhshalizadeh

<prev • 17 results • page 1 of 2 • next >
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Which of the R packages is better suited for estimating the GWAS meta-analysis "random effects model"?
... Hi, Does anyone know the best package for estimating the random effects model? Best Regards ...
random effects model written 17 months ago by somayeh bakhshalizadeh50 • updated 14 months ago by Biostar ♦♦ 20
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How can I draw gating networks using the Cytoscape software for meta-analysis of GWAS data? Can anyone help me?
... Hello, To create genetic networks in 24 studies, I have different genes for each study and have rsSNP, P-value, SE, Beta, MAF values and ...: like this: In the first study: rsSNP N Position Beta SE P-value Gene Name MAF And the rest of the stu ...
gene written 19 months ago by somayeh bakhshalizadeh50
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Comment: C: Is the dbSNP site filtered?
... Thank you for your guide. ...
written 22 months ago by somayeh bakhshalizadeh50
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Comment: C: Is the dbSNP site filtered?
... Yes I am an Iranian, this site was working before. But now it's a problem. Whether it is updated? ...
written 22 months ago by somayeh bakhshalizadeh50
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Is the dbSNP site filtered?
... Hello friends. Is the dbSNP site (http://www.bioinfo.org.cn/relative/dbSNP%20Home%20Page.htm) filtered? It does not work for me. ...
snp written 22 months ago by somayeh bakhshalizadeh50
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Comment: C: How can I convert -log10 (p-value) to p-value?
... Thank you so much for your reply. ...
written 22 months ago by somayeh bakhshalizadeh50
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Comment: C: How can I convert -log10 (p-value) to p-value?
... Thank you for your reply, Here: logp<- -log10(p) # = 2 What does the number 2 mean? ...
written 22 months ago by somayeh bakhshalizadeh50
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How can I convert -log10 (p-value) to p-value?
... Hello, Example: –log10 (p-value)= 11.28 p-value??? Can anyone help? Thanks in advance. Best regards, ...
p-value written 22 months ago by somayeh bakhshalizadeh50 • updated 22 months ago by dariober11k
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Comment: C: Genome wide association studies (GWAS) Meta-analysis
... In my first study, I have these BTAs: exp(1): 2.718282, exp(3):20.08554, exp(5): 148.4132, exp(8):2980.958, exp(9):8103.084, exp(11):59874.14, exp(14):1202604, exp(18):65659969, exp(19): 178482301, exp (21):1318815734, exp(23):9744803446 Ranged from 2.72 to 9744803446. ...
written 24 months ago by somayeh bakhshalizadeh50
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Comment: C: Genome wide association studies (GWAS) Meta-analysis
... Hello, Thank you so much for your reply, For example: (SNP name: rs41646593, **BTA:1**, Position (bp): 2515412, Gene name:MIS18A) Here BTA = 1, as you said: Can you confirm what is the BTA column in your data? - this is likely the **beta coefficient**. If you obtain the exponent of this, then ...
written 24 months ago by somayeh bakhshalizadeh50

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