User: geneticatt

gravatar for geneticatt
geneticatt0
Reputation:
0
Status:
New User
Last seen:
5 days, 10 hours ago
Joined:
1 year, 6 months ago
Email:
g*********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by geneticatt

<prev • 3 results • page 1 of 1 • next >
0
votes
1
answer
190
views
1
answers
Comment: A: HISAT2 alignment problem
... I'm getting the same error when running hisat2 (also as a batch submission script). I don't have permissions to edit the script on our cluster. For the case that it does need to be fixed, is there a way to copy the script and provide its location in the batch script so that hisat is provided the alt ...
written 8 days ago by geneticatt0
0
votes
1
answer
210
views
1
answer
Subsetting GFF3 files for gene models using Bash
... Hi all, **I've been wondering about best practices in pattern matching in bash. On sizable files and with lots of strings to search for, the issue becomes computationally burdensome quickly. Here's an example to illustrate a problem I've had. Hoping to learn about alternative solutions here.** I g ...
genome annotation bash gff3 braker2 written 3 months ago by geneticatt0 • updated 3 months ago by lieven.sterck7.8k
0
votes
1
answer
871
views
1
answers
Answer: A: interpretation of orthofinder result
... It seems like they are taking genes from that weren't assigned to orthogroups and attempting to align them to the genes of the other species before calling them species specific. There is a file in the orthofinder output call 'Orthogroups_UnassignedGenes.csv' which contains the genes that would be u ...
written 11 months ago by geneticatt0

Latest awards to geneticatt

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 831 users visited in the last hour