User: naveen_gabriel
naveen_gabriel • 0
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... Observed to Expected CpG is calculated as below :
Obs/Exp CpG = Number of CpG * N / (Number of C * Number of G) where N = length of sequence.
I also don't understand the expected CpG which is:
Expected = (Number of C * Number of G)/ N
Can someone give an example or intuiti ...
written 7 weeks ago by
naveen_gabriel • 0
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... To fit the brownian motion for independent evolution of traits i used below code:
rownames(carni)<-gsub("_",".",rownames(carni)) #Renaming to match the tip of tree
#Independent Evolution
brown_indepen <- mvBM(carni_tree,carni,param=list(constraint="diagonal"))
mvBM is the functi ...
written 10 weeks ago by
naveen_gabriel • 0
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