User: m.wekking
m.wekking • 10
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Posts by m.wekking
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... I have a File that contains certain enhancer regions per chromosome and per region how many reads are found from different samples. The 1 and the 2 stand for the two different groups I have. The original file is tab delimited. I.E.:
$ cat enhancers.bed
chr | start | end | sample1a | sample ...
written 8 weeks ago by
m.wekking • 10
• updated
8 weeks ago by
shawn.w.foley • 180
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... For This current project I have in total 3 different files but for other projects it is possible that I have more than five repeats .. So I need a solution that works for a varying amount of files ... ...
written 10 weeks ago by
m.wekking • 10
0
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2
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204
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... Thank you very much! will this also work if I have more than 2 .bed files? ...
written 10 weeks ago by
m.wekking • 10
1
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2
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204
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... I have .bed files with different peaks and I need to find the overlap, but when two peaks overlap I want the program to return the outer boundries of the two peaks, i.e.
$ cat sample1.bed
chr1 20 40
chr1 60 80
chr2 80 120
$ cat sample2.bed
chr1 17 35
...
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