User: sana777munquad

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Posts by sana777munquad

<prev • 12 results • page 1 of 2 • next >
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Comment: C: Regarding WGCNA gene expression data
... No I dont want to change the method of correlation.I want to change the correlation value for gene expression prediction like if I will get 0.7 then we can say that it is good result. one more thing how can I edit the p-value in code.like someone taken 0.05 and others are taking 0.01. ...
written 11 days ago by sana777munquad0
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Comment: C: Regarding WGCNA gene expression data
... I have a matrix of RNA-seq data of genes vs samples. I want to find out co-related genes from WGCNA. I am not using any clinical trait. ...
written 11 days ago by sana777munquad0
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Regarding WGCNA gene expression data
... Currently I am working on WGCNA, using gene expression data. In WGCNA correlation and p-value is default or we can reset it. I am confused. if i want to reset the correlation & p-value then how to reset it? Plz help me out. ...
genomic written 11 days ago by sana777munquad0
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regarding classification of genes
... If I have a list of genes then how i can categorized in transcription factor splicing factor and signaling molecule. is there any webserver or program by which we can classify. ...
genome written 26 days ago by sana777munquad0 • updated 26 days ago by jonasmlambert10
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Gene Set Enrichment Analysis
... In gene set enrichment analysis, I found many pathways but am unable to differentiate which pathway involve in cancer. So anyone can suggest me? ...
gsea written 7 months ago by sana777munquad0
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Comment: C: GTEx for brain data
... yes I want raw data of brain ...
written 9 months ago by sana777munquad0
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GTEx for brain data
... How can I get brain tissue data from GTEx website.?Anyone can suggest me to solve this. ...
tissue written 9 months ago by sana777munquad0 • updated 9 months ago by hubbardl0
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Comment: C: Oncodriveclust R Package
... i am using this command oncodriveclust -o data/output.csv -m 3 --cgc data/Brain_original.csv examples/tcga.BRCA.nonsyn.txt examples/tcga.BRCA.syn.txt data/gene_transcripts.tsv ...
written 10 months ago by sana777munquad0 • updated 10 months ago by Kevin Blighe51k
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Oncodriveclust R Package
... Actually i am trying to upload cosmic file in oncodriveclust R package but am unable to upload. Anyone suggest me to how to upload the file to get the results. ...
cosmic file written 10 months ago by sana777munquad0 • updated 9 months ago by Biostar ♦♦ 20
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Comment: A: Normalization of gene
... I am trying to find frequency normalization of gene length. I have taken cosmic data of particular genome. So please suggest what are the methods to find out this approach? ...
written 11 months ago by sana777munquad0

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