User: cdsouthan
cdsouthan • 1.8k
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Curator at Guide to PHARMACOLOGY database See http://www.linkedin.com/in/cdsouthan
Posts by cdsouthan
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... Thanks, I guessed as much but does anyone have even rough overall stats of that three-way split?
...
written 4 months ago by
cdsouthan • 1.8k
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... As most of us know GeneRIF allow scientists to add to the functional annotation of genes described in Gene (i.e. RefSeq also)
Are most of these actually submitted by authors or do the NCBI Biocurators also push these in themselves when checking the literature for which Pubs to link to genes? ...
written 4 months ago by
cdsouthan • 1.8k
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... Apols if I miscommunicated. Names are particularly important for the Guide to Pharmacology because we have to grapple with and curate three different sets of target names from Swiss-Prot, HGNC and the IUPHAR Nomenclature Committee (NC-IUPHAR). We use Symbols of course and collaborate with HGNC but ...
written 4 months ago by
cdsouthan • 1.8k
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... As we know Swiss-Prot Recommended protein names and HGNC Approved gene names can be different for the same protein. The question is exactly how many are different?
On the admittedly crude basis of exact text string matches on download lists from both sides the overlap is only 91! However, this ...
written 4 months ago by
cdsouthan • 1.8k
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... Take my word for it this is not an authentic conference but they will gladly take your registration cash for what will be a rip-off. The giveaway signs are too numerous to mention but a) this is a fake Biostar user that has only posted this conference, b) the announcement above is hyperbolic broke ...
written 5 months ago by
cdsouthan • 1.8k
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... This has the hallmarks of a predatory conference, beware ...
written 10 months ago by
cdsouthan • 1.8k
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Answer:
A: Fold recognition application
... Don't bother, try Phyre https://cdsouthan.blogspot.se/2018/03/playing-with-phyre.html
(DOInt I'm on the SAB) ...
written 10 months ago by
cdsouthan • 1.8k
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... From the ∼3500 author-submitted GenBank accessions per-day does anyone know roughly how many Pubmed IDs this (would) translate to (per-day)? ...
written 10 months ago by
cdsouthan • 1.8k
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... I (and others I'm sure) would be very interested to hear how you get on with this. AWAK one of the problems is there is no usable definition of common name (although synonym PubMed counts could do as a rough proxy) ...
written 11 months ago by
cdsouthan • 1.8k
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... Has anyone already generated the set of FASTA peptides as PTM excision products with potential bioactivity from all human precursor proteins?
We'd like to compare these to the bioactive human endogenous peptides we have curated over the years in the Guide to Pharmacology e.g. http://www.guidetop ...
written 11 months ago by
cdsouthan • 1.8k
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