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Posts by SeaStar
... Hello! I'm searching for suggestion about the new best pipeline/s to find TRANSPOSABLE ELEMENTS in a new assembled genome of a no reference species (octopus). I don't want to use repeatmasker. Can anyone help me? ...
Comment: C: random sampling genome.fa
... Hi genomax, I'm the user fripeki but I could not post anymore with that account (reaching max limit of 5 post for day). I Appreciated your idea. Can you suggest me a command to cut the file into 3 approximately equal parts? Sorry I'm learning bioinformatic so I don't know all the solutions ...
... hello, I'm new here. I was using trimmomatic and I put this commands, trimmomatic PE -phred33 testadapt.1.fastq testadapt.2.fastq test_trim_paired.1.fq.gz testes_trim_unpaired.1.fq.gz test_trim_paired.2.fq.gz test_trim_unpaired.2.fq.gz ILLUMINACLIP:/home/lab/Software/Trimmomatic-0.38/adapte ...
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