User: amulyashastry

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Posts by amulyashastry

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Answer: A: How to add biological annotations using R
... BiomaRt is my first option. Although, I occasionally use AnnotationDBI package. ...
written 1 day ago by amulyashastry40
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Answer: A: How to export heatmap clusters to csv?
... Try saving it to a large pdf or as an image. pdf("heat maps.pdf", height =1000, width= 1000) plot_heatmap{your code} dev.off() This should save the plot to your working directory. You can also change pdf to png for an image. ...
written 1 day ago by amulyashastry40
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Answer: A: Running STAR aligner with paired-end and single-end reads simultaneously
... Hello, I would also recommend producing a correlation (Spearman or Pearson) distance matrix to see how well the samples correlate within their group. DESEQ2 has this option to produce heatmaps of distance matrix as well. ...
written 7 days ago by amulyashastry40

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