User: David

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David0
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Posts by David

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Comment: C: bcl2fastq discard complete read
... Ok. Strange though! Thanks for your time! ...
written 6 days ago by David0
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Comment: C: bcl2fastq discard complete read
... I had tried that before. Tried it again to no avail: 2020-03-25 16:48:36 [7f311c418700] WARNING: Mismatching cluster count in positions file: Cycle #1, Tile#1101: bytes_read=4091904 bytes_expected=2988132 2020-03-25 16:48:36 [7f311c418700] WARNING: Mismatching cluster count in filter file: ...
written 6 days ago by David0 • updated 6 days ago by genomax80k
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Comment: C: bcl2fastq discard complete read
... Hi Genomax. That's what i did, the formatting got lost. i used `--use-bases-mask N*,I*,Y*`. Sorry for that. I tried it both with capital N & normal n. Indeed it's 10x. But also other constructs in the pool. The 10x demultiplexing with cellranger went fine. ...
written 6 days ago by David0
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bcl2fastq discard complete read
... Hi, I'm trying to demultiplex a run with Read settings: 28-8-91. However, I don't need read 1 for this. Therefore, I set `--use-bases-mask N*,I*,Y*.` Nevertheless, this consistently fails with the following output: 2020-03-25 15:43:25 [7f093bf05700] WARNING: Mismatching cluster count in po ...
bcl2fastq demultiplexing written 6 days ago by David0 • updated 6 days ago by RamRS26k

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