User: dim.thebiologist

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Posts by dim.thebiologist

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Comment: C: Extract novel motifs from protein multiple sequence alignment
... Thank you for your response. I have a group of 32 proteins, members of the same protein family. I'm trying to detect common de novo motifs (2-15 aa) in this protein group. So maybe GLAM2 is a better choice for this. I want to look in certain areas of the proteins, so I thought maybe if I could acces ...
written 29 days ago by dim.thebiologist0
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Extract novel motifs from protein multiple sequence alignment
... Hello world! I am new to R, and I would like some tips on motif detection in a protein multiple sequence alignment. I would like to extract the motifs using only some parts of the alignment (ex. aa 23-58, 123-567 etc). I have already created a multiple sequence alignment of orthologues of this pro ...
R alignment motif written 4 weeks ago by dim.thebiologist0

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