User: AS

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AS0
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Posts by AS

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Comment: A: Error using Tabix
... Thanks for the answers. I have downloaded the vcf from : ftp://ftp.sra.ebi.ac.uk/vol1/ERZ696/ERZ696780/chr8_eva.vcf.gz. The size of the download file is ok compare to the size indicated on the website. I have tried to look at the file and I found strange that the ID seem full of NA and no sample ...
written 16 months ago by AS0 • updated 16 months ago by finswimmer13k
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Comment: A: Error using Tabix
... I succeed to check the data of the .vcf.gz but I haven't found a way to look inside the tbi. Could you please indicate me a way to do it ? ...
written 16 months ago by AS0
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Error using Tabix
... Hi, I am trying to use vcf files downloaded from public database (NCBI SRA Bioproject:PRJNA486011). I am using only R to do that because I don’t know any other language. I have put the gz and the gz.tbi in the same folder. >vcf.fl <- list.files("path/to/vcfs", full.names=TRUE, pattern=" ...
vcf R tabix written 16 months ago by AS0 • updated 16 months ago by dariober11k

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