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1
vote
2
replies
1.2k
views
Absolute segmentation file result
sequencing alignment genome
written 4.8 years ago by ▴ 50
1
vote
2
replies
1.0k
views
question about translocation of SV caller output
sequencing genome
updated 20 months ago by ▴ 120 • written 4.7 years ago by ▴ 50
3
votes
1
reply
770
views
is there any other value for evaluating Sequence Mapping??
sequencing alignment assembly Assembly
updated 3.4 years ago by 20 • written 5.0 years ago by ▴ 50
0
votes
1
reply
627
views
why snp class classified into 6 class?
snp
3.4 years ago by 9521ljh ▴ 50
0
votes
0
replies
496
views
Comment: C: allele specific mutation ?
3.6 years ago by 9521ljh ▴ 50
0
votes
2
replies
496
views
allele specific mutation ?
sequencing next-gen
3.6 years ago by 9521ljh ▴ 50
0
votes
1
reply
817
views
Variant allele frequency with copy number
sequencing SNP
3.6 years ago by 9521ljh ▴ 50
0
votes
0
replies
518
views
Annovar annotation with specific ENST region ( retain_intron exon)
RNA-Seq next-gen
3.9 years ago by 9521ljh ▴ 50
0
votes
0
replies
620
views
Comment: C: Methylation normalization between samples from different platform
4.0 years ago by 9521ljh ▴ 50
2
votes
2
replies
620
views
Methylation normalization between samples from different platform
gene
updated 4.0 years ago by 81k • written 4.0 years ago by ▴ 50
4
votes
1
reply
670
views
Methylation analysis if no normal control
rna-seq
4.0 years ago by 9521ljh ▴ 50
0
votes
1
reply
720
views
Cell line RNA differentially expression gene
RNA-Seq
updated 4.0 years ago by 87k • written 4.0 years ago by ▴ 50
0
votes
0
replies
1.1k
views
RNA log2 fold change in FPKM
RNA-Seq
4.0 years ago by 9521ljh ▴ 50
0
votes
5
replies
791
views
How to do if no normal control for RNA
next-gen RNA-Seq
updated 4.1 years ago by 19k • written 4.1 years ago by ▴ 50
0
votes
0
replies
865
views
Comment: C: Comparing RNA expression between different tissue type, but same Cancer.
4.2 years ago by 9521ljh ▴ 50
0
votes
2
replies
865
views
Comparing RNA expression between different tissue type, but same Cancer.
RNA-Seq
updated 4.2 years ago by 19k • written 4.2 years ago by ▴ 50
3
votes
1
reply
2.5k
views
GeneHancer Database download link
sequencing next-gen
updated 4.2 years ago by 20 • written 4.2 years ago by ▴ 50
0
votes
2
replies
1.2k
views
RNA-seq batch effect remove
RNA-Seq sequencing
updated 4.2 years ago by 20 • written 4.2 years ago by ▴ 50
0
votes
1
reply
675
views
whole genome sequencing analysis for one sample
genome rna-seq
updated 4.2 years ago by ▴ 1000 • written 4.2 years ago by ▴ 50
4
votes
3
replies
1.3k
views
Circos plot tool
next-gen sequence R
updated 4.2 years ago by 20 • written 4.2 years ago by ▴ 50
0
votes
1
reply
483
views
DAVID multiple input
gene next-gen sequencing
4.3 years ago by 9521ljh ▴ 50
2
votes
3
replies
792
views
Predict function by Mutation?
SNP gene sequencing next-gen
updated 4.3 years ago by 87k • written 4.3 years ago by ▴ 50
0
votes
2
replies
1.1k
views
Fusion orientation make sense or not
sequencing sequence next-gen gene
updated 4.3 years ago by • 0 • written 4.4 years ago by ▴ 50
3
votes
2
replies
1.2k
views
mRNA, ceRNA, miRNA network database
rna-seq R next-gen
updated 4.4 years ago by 19k • written 4.4 years ago by ▴ 50
6
votes
4
replies
799
views
is there any database that show RNA false positive?
RNA-Seq next-gen sequencing
updated 4.4 years ago by ★ 4.0k • written 4.4 years ago by ▴ 50
0
votes
2
replies
2.0k
views
extract discordant,split reads from BAM file
next-gen sequencing sequence
updated 4.5 years ago by 35k • written 4.5 years ago by ▴ 50
4
votes
1
reply
654
views
How to know does DNA variant sequencing (eg. somatic variant) affect to Protein structure?
RNA-Seq rna-seq sequence sequencing next-gen
updated 4.5 years ago by ▴ 380 • written 4.5 years ago by ▴ 50
1
vote
1
reply
704
views
why telomere position do not have any reference ?
next-gen sequencing alignment
updated 4.5 years ago by 20 • written 4.7 years ago by ▴ 50
4
votes
1
reply
707
views
RNA and DNA variant difference
next-gen rna-seq genome sequencing
4.5 years ago by 9521ljh ▴ 50
0
votes
0
replies
1.6k
views
Comment: C: How to check exon count of gene?
4.5 years ago by 9521ljh ▴ 50
0
votes
1
reply
1.6k
views
Comment: C: How to check exon count of gene?
4.5 years ago by 9521ljh ▴ 50
0
votes
3
replies
1.6k
views
How to check exon count of gene?
sequence sequencing next-gen
updated 4.5 years ago by ▴ 180 • written 4.5 years ago by ▴ 50
0
votes
1
reply
999
views
Does TCGA rna-seq data include fusion gene expression?
sequencing RNA-Seq sequence next-gen
updated 4.6 years ago by 87k • written 4.6 years ago by ▴ 50
9
votes
4
replies
2.3k
views
hg19 exon, intron, UTR region
sequencing next-gen
updated 4.6 years ago by 161k • written 4.6 years ago by ▴ 50
5
votes
2
replies
1.1k
views
gene transcription direction
sequencing genome gene
updated 4.6 years ago by 43k • written 4.6 years ago by ▴ 50
3
votes
1
reply
841
views
where to get Gene strand file?
sequence gene
updated 4.6 years ago by 81k • written 4.6 years ago by ▴ 50
0
votes
0
replies
1.1k
views
Comment: C: gene transcription direction
4.6 years ago by 9521ljh ▴ 50
0
votes
0
replies
2.2k
views
Comment: C: where to get Whole Genome Sequencing of Cell line?
4.6 years ago by 9521ljh ▴ 50
0
votes
0
replies
2.2k
views
Comment: C: where to get Whole Genome Sequencing of Cell line?
4.6 years ago by 9521ljh ▴ 50
0
votes
0
replies
2.2k
views
Comment: C: where to get Whole Genome Sequencing of Cell line?
4.6 years ago by 9521ljh ▴ 50
5
votes
5
replies
2.2k
views
where to get Whole Genome Sequencing of Cell line?
genome sequencing sequence
updated 4.6 years ago by ★ 3.2k • written 4.6 years ago by ▴ 50
3
votes
2
replies
766
views
What is best tool for Cohort data of DNA?
next-gen sequencing sequence gene
updated 4.7 years ago by ★ 1.3k • written 4.7 years ago by ▴ 50
0
votes
0
replies
1.1k
views
Answer: C: Why samtools depth error
4.7 years ago by 9521ljh ▴ 50
0
votes
0
replies
1.1k
views
Comment: C: Why samtools depth error
4.7 years ago by 9521ljh ▴ 50
0
votes
1
reply
1.1k
views
Comment: C: Why samtools depth error
4.7 years ago by 9521ljh ▴ 50
0
votes
4
replies
1.1k
views
Why samtools depth error
sequence gene sequencing
4.7 years ago by 9521ljh ▴ 50
0
votes
2
replies
1.4k
views
Comment: C: extract region from the bam file
4.8 years ago by 9521ljh ▴ 50
0
votes
5
replies
1.4k
views
extract region from the bam file
assembly sequencing genome
4.8 years ago by 9521ljh ▴ 50
2
votes
2
replies
705
views
How to mapping DNA read pairs to reference according to particular gene ?
genome next-gen sequencing gene assembly
4.8 years ago by 9521ljh ▴ 50
0
votes
1
reply
585
views
Varscan parameters(options) value
genome sequencing sequence snp
updated 4.8 years ago by 20 • written 5.0 years ago by ▴ 50
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