User: choi.yisoo.hi

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Posts by choi.yisoo.hi

<prev • 10 results • page 1 of 1 • next >
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soapdenovo2 install on UBUNTU 18.04LTS
... Hello, is there anyone who install soapdenovo2 on UBUNTU18.04? I want to use this program, but I cannot make this source. I downloaded it from both https://github.com/aquaskyline/SOAPdenovo2, https://sourceforge.net/projects/soapdenovo2/. Then decompress file and make. make[1]: Leaving direc ...
assembly ubuntu18.04 ubuntu18 make soapdenovo2 written 3 days ago by choi.yisoo.hi0 • updated 2 days ago by colindaven1.2k
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Comment: C: Segmentation fault (core dumped) in SOAP
... Yes it was. I edited! ...
written 4 weeks ago by choi.yisoo.hi0
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Segmentation fault (core dumped) in SOAP
... Hi, everybody. Now I am trying to de novo assembly by SOAP. My excuted code is this. ~/Downloads/SOAPdenovo2-bin-LINUX-generic-r240/SOAPdenovo-63mer all -s SOAPdenovo.config -o K47 -K -R 1>/home/Assembly/Cyanea-nozakii/all.log 2>/home/Assembly/Cyanea-nozakii/all.err After it finish, occ ...
assembly fastq sequence soap written 5 weeks ago by choi.yisoo.hi0
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Comment: C: R packages for genome assembly in R
... Thank you very much. I was so confused. Your answer is very helpful. ...
written 7 weeks ago by choi.yisoo.hi0
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R packages for genome assembly in R
... Hi, I have some questions about assembly. I am a really beginner so probably my questions are look like stupid questions. I know.;(((( 1. Is there any package for assembly(especially de novo)? 2. What is different alignment(mapping) and assembly? And if you know the way to do assembly please tel ...
R ngs assembly written 7 weeks ago by choi.yisoo.hi0 • updated 7 weeks ago by Vijay Lakhujani4.1k
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Comment: C: fq.gz file use
... I want to make assembly pipeline with Illumina template. Is it possible? ...
written 11 weeks ago by choi.yisoo.hi0
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Comment: C: fq.gz file use
... nope, just I don't know how can treat those files. ...
written 11 weeks ago by choi.yisoo.hi0
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Comment: C: fq.gz file use
... I receive assembly result so I want check it. ...
written 11 weeks ago by choi.yisoo.hi0
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Comment: C: fq.gz file use
... ok, thank you for your answer. ...
written 11 weeks ago by choi.yisoo.hi0
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fq.gz file use
... I am novice so maybe my questions looks stupid. I want use fq,gz file in R. So I decompress it by `gunzip()` then it became .fq format file. How can I use .fq.gz file? And I wonder can I open .fq.gz file in BioEdit.? Please answer. thank you. ...
R bioedit fq.gz written 11 weeks ago by choi.yisoo.hi0

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