User: Liftedkris

gravatar for Liftedkris
Liftedkris10
Reputation:
10
Status:
New User
Location:
Germany
Last seen:
8 months, 4 weeks ago
Joined:
10 months, 3 weeks ago
Email:
c*********@gmail.com

Posts by Liftedkris

<prev • 30 results • page 1 of 3 • next >
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Comment: C: Map genes to the ids
... thanks so much this is fantastic! but now i have almost 9000 of the genes, how do i handle it because it is too much to be entered manually? ...
written 8 months ago by Liftedkris10
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Comment: C: Map genes to the ids
... thanks for your response and suggestion, however this did not accept my ids. here is a sample AFUA_3G06190 AFUA_3G06200 AFUA_3G06210 AFUA_3G06230 AFUA_3G06250 AFUA_3G06255 AFUA_3G06260 AFUA_3G06270 AFUA_3G06280 AFUA_3G06290 AFUA_3G06300 AFUA_3G06310 ...
written 8 months ago by Liftedkris10 • updated 8 months ago by RamRS25k
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Comment: C: Map genes to the ids
... thanks so much for efforts to assist me. what i have is a bunch of around 9000 fungi gene stable IDs. here is a sample AFUA_3G06190 AFUA_3G06200 AFUA_3G06210 AFUA_3G06230 AFUA_3G06250 AFUA_3G06255 AFUA_3G06260 AFUA_3G06270 AFUA_3G06280 AFUA_3G06290 AFUA_ ...
written 8 months ago by Liftedkris10 • updated 8 months ago by RamRS25k
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Comment: C: Dynamic PPI interaction analysis
... Thanks so much. This should help ...
written 8 months ago by Liftedkris10
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(Closed) Database to map Fungi genes to there IDs
... Hi please which database can one use to map fungi genome (Aspergillus fumigatus) to their EntrezID or Ensembl gene ID? Thanks ...
genome written 9 months ago by Liftedkris10
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Comment: C: Dynamic PPI interaction analysis
... Please which R package can I use for that? Thanks ...
written 9 months ago by Liftedkris10
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Comment: C: Protein protein network analysis
... Ok thanks. I was able to fix it Thanks 🙏 ...
written 9 months ago by Liftedkris10
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Comment: C: Protein protein network analysis
... Sorry for the late response, I’m using cytoscape ...
written 9 months ago by Liftedkris10
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Dynamic PPI interaction analysis
... Hi fellows I need to construct a dynamic PPI interaction analysis using gene expression data from three time points. I have this cytoscape app called DyNetViewer which requires me to put the data in a txt file before uploading it. I have my data in txt file but it gives error message “interrupted”. ...
genome written 9 months ago by Liftedkris10
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Protein protein network analysis
... During protein protein network interaction analysis, we have in-degree and out-degree and we also have EdgeCount. Please in calculating the hub nodes, which of the values is used? In degree or out degree? Or EdgeCount which is sum of in-degree and out-degree Thanks ...
ppi written 9 months ago by Liftedkris10

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