User: bioinformatics_kiev

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Posts by bioinformatics_kiev

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How to fix svr_call_rnas MyRAST SEED function call error on a Linux Mint OS?
... When I run MyRAST Linux bash code: svr_call_rnas mycobacterium m.tuberculosis bacteria rnas.fasta an error arises: Not an ARRAY reference at /usr/lib/myrast/plbin/svr_call_rnas.pl line 92. How to fix that, pls? ...
myrast software error seed annotation written 8 months ago by bioinformatics_kiev0 • updated 8 months ago by genomax74k
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What SEED MyRAST annotation functions will work on Linux Mint correctly?
... I am running a bash code on Linux machine: svr_psiblast_search < pilon_output.pilon.fasta > results.tab and get: s500 Error detected by service. at /usr/lib/myrast/lib/ClientThing.pm line 686 ClientThing::_send_request('ATserver=HASH(0x2d29c38)', 'function', 'psiblast_search' ...
myrast annotation software error seed written 8 months ago by bioinformatics_kiev0 • updated 8 months ago by genomax74k
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How to install MyRAST tool on Linux Mint correctly?
... I have followed instructions at the SEED page, when calling myrast get: Can't load '/usr/lib/myrast/lib/perl5/site_perl/5.12.3/i686-linux/auto/Wx/Wx.so' for module Wx: libwx_gtk2u_adv-2.8.so.0: cannot open shared object file: No such file or directory at /usr/lib/myrast/lib/perl5/5.12.3/i686-l ...
myrast written 8 months ago by bioinformatics_kiev0 • updated 8 months ago by curious140

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