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pLoF variants for gnomAD v.4
gnomAD pLoF variants grch38
21 days ago by Damianos P. Melidis ▴ 40
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642
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How to map human variant to correspoding knock-allele in mouse
HMDC mouse MGI functional_assay knock-in
4.1 years ago by Damianos P. Melidis ▴ 40
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961
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Curated annotation files for human mutation hotspots
mutation hotspot annotation human
updated 4.3 years ago by 20 • written 4.4 years ago by ▴ 40
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2
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1.3k
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VEP coordinates do not result to same sequence as ref sequence in gsvar file
VEP pyensembl deletion GRCh37
4.4 years ago by Damianos P. Melidis ▴ 40
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873
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How to extract start codon position when start codon annotation does not exists
pyensembl start_codon coding_sequence GRCh37
4.5 years ago by Damianos P. Melidis ▴ 40
2
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2
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1.9k
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Extracting FILTER field from gnomAD vcf file
vcf PyVCF gnomAD
4.5 years ago by Damianos P. Melidis ▴ 40
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6
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3.7k
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How to use entrezpy and Biopython Entrez libraries to access ClinVar data from genomic position of variant
entrezpy ClinVar Python3 BioPython Entrez
4.9 years ago by Damianos P. Melidis ▴ 40
3
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4
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1.4k
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How to select pairs to have a significant sample for similarity
similarity gene ontology sampling pairs
updated 5.5 years ago by 20 • written 5.6 years ago by ▴ 40
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854
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Does ParentChildTreeFile.txt of Interpro has a specific tree format?
interpro ParentChild tree_format
updated 5.6 years ago by 20 • written 5.7 years ago by ▴ 40
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840
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Retrieving similarity of Interpro domains
interpro meta-data
5.7 years ago by Damianos P. Melidis ▴ 40
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769
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Calculate the SNP effect on binding site and RNA fold for Bacteria
SNP Bacteria RNA_fold binding_site
5.9 years ago by Damianos P. Melidis ▴ 40
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