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questions
2
votes
4
replies
1.2k
views
structural variant discovery from highly mutated viral population using nanopore
Assembly
sequencing
nanopore
updated 2.4 years ago by
Brunox13
▴ 50 • written 3.1 years ago by
rezaeir75
▴ 40
7
votes
7
replies
2.7k
views
Is rsubread splice-aware? Should I use HISAT2, rsubread, or some other aligner?
R
rna-seq
alignment
rsubread
updated 3.5 years ago by
ATpoint
81k • written 3.9 years ago by
rezaeir75
▴ 40
4
votes
6
replies
2.6k
views
BLAST configuration for siRNA off-target search
sequence
blast
3.7 years ago by
rezaeir75
▴ 40
1
vote
12
replies
3.2k
views
Resources to learn genome assembly workflow for small genomes (like viruses)
Assembly
genome
sequencing
updated 3.7 years ago by
KH
▴ 80 • written 3.7 years ago by
rezaeir75
▴ 40
0
votes
2
replies
606
views
How to measure viral abundance in competitive fitness assay with de novo assembly?
Assembly
rna-seq
alignment
genome
3.7 years ago by
rezaeir75
▴ 40
0
votes
4
replies
1.6k
views
Differential Gene Expression with Replicates for some of the samples
RNA-Seq
edger
limma
deseq2
updated 3.7 years ago by
Ali T. A.
▴ 30 • written 3.7 years ago by
rezaeir75
▴ 40
2
votes
2
replies
1.1k
views
miRNA-mRNA correlation data analysis
RNA-Seq
network
miRNA-mRNA
updated 3.9 years ago by
aboozar.soorni
▴ 30 • written 3.9 years ago by
rezaeir75
▴ 40
0
votes
0
replies
1.8k
views
Specify a blosum matrix in multiple sequence alignment using ClustalwCommandline
alignment
5.0 years ago by
rezaeir75
▴ 40
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