User: oussriradnane

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Posts by oussriradnane

<prev • 19 results • page 1 of 2 • next >
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Generate SNP/indel annotation
... I have a .tab file with SNPs from a fungi genome and i want to find if the SNPs are located inside genes, are there any tools that I can use and give me the names of the genes that contains the snps ...
genome snp written 17 months ago by oussriradnane0
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Comment: C: determination of species level
... I am trying to confirm the results of a phylogenetic tree, for that I am looking for these parametric parameters (ani, ddh, gAni), I already did the same thing with prokaryotic genomes but for eukaryotic genomes it does not work, my question is what there are parameters for confirmed the results of ...
written 19 months ago by oussriradnane0
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determination of species level
... hi all are there any software or methods for calculating ANI (average nucleotide identity) and DDH (dna dna hybridization) and gANI values ​​for eukaryotic species ...
alignment ani ddh written 19 months ago by oussriradnane0
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Comment: C: mash configure error --with-gsl can not find gsl
... thank you michael.ante ...
written 19 months ago by oussriradnane0
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mash configure error --with-gsl can not find gsl
... Hi, could you help me with this? i want to instal the FastAni software I have installed the gsl library , and feed the path to --with-gsl , but it just not work: adnane@adnane-Presario-CQ56-Notebook-PC:~/Bureau/FastANI-master$ ./configure checking for g++... g++ checking whether t ...
software error written 19 months ago by oussriradnane0 • updated 19 months ago by genomax92k
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constuction of pan and accessory genomes
... Hello, Is there any software for construction of pan and accessory genomes? I'm working on eukaryotic genomes, I'm trying to make a genomic comparison between eukaryotic species ...
genome alignment written 19 months ago by oussriradnane0
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Comment: C: Whole genome alignments
... my strains have 4 chromosomes, can I compare chrormosome by chromosome or gather all genes (concatenated) in a sequence and deduce it as a single genome ...
written 19 months ago by oussriradnane0
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Comment: C: Whole genome alignments
... thank you ...
written 19 months ago by oussriradnane0
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Comment: C: Whole genome alignments
... I have 10 genomes , I want to make a comparative analysis of these genomes to determine the evolutionary relationship between the strains ...
written 19 months ago by oussriradnane0
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Comment: C: Whole genome alignments
... homology ...
written 19 months ago by oussriradnane0

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