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1
vote
1
reply
2.3k
views
Assigning row annotations to pheatmap
pheatmap RNAseq R
updated 2.3 years ago by 11k • written 2.3 years ago by ▴ 80
4
votes
3
replies
1.5k
views
Exporting the list of top loading genes from a particular principal component
PCAtools
updated 3.1 years ago by 87k • written 3.1 years ago by ▴ 80
2
votes
7
replies
1.8k
views
PCAplot to investigate PC2 loadings using DESeq data
PCATools
3.1 years ago by n.tear ▴ 80
0
votes
0
replies
628
views
Error when running QoRTs for JunctionSeq
QoRTs JunctionSeq RNA-Seq
3.2 years ago by n.tear ▴ 80
0
votes
5
replies
4.8k
views
Where should I install packages on WSL
WSL linux htslib
3.5 years ago by n.tear ▴ 80
0
votes
1
reply
1.1k
views
tximeta parse error
RNA-Seq tximeta
updated 3.7 years ago by 87k • written 3.8 years ago by ▴ 80
0
votes
1
reply
574
views
Using a script to create a binary file. Help with arguments
R RNA-Seq
3.7 years ago by n.tear ▴ 80
5
votes
8
replies
3.8k
views
How do I use bash loop to map with Salmon on files in multiple folders
RNA-Seq mapping bash loop
updated 3.8 years ago by ★ 4.4k • written 3.8 years ago by ▴ 80
2
votes
3
replies
621
views
How to colour all points that agree with multiple conditions
R RNA-Seq
updated 3.9 years ago by ★ 1.9k • written 3.9 years ago by ▴ 80
0
votes
1
reply
1.9k
views
Best values to report. svalues? padj values? IHW results values? apeglm shrinkage values?
RNA-Seq apeglm
updated 3.9 years ago by 87k • written 3.9 years ago by ▴ 80
1
vote
12
replies
4.1k
views
Error in `[.data.frame`(res.df, , cols) : undefined columns selected when exporting glimma
RNA-Seq
3.9 years ago by n.tear ▴ 80
1
vote
5
replies
1.0k
views
How can I plan my experimental samples to decrease batch effects / allow for better correction?
RNA-Seq
4.6 years ago by n.tear ▴ 80
6
votes
7
replies
2.8k
views
Running mutltiple Fastq files with Hisat2 in a loop
RNA-Seq
updated 4.8 years ago by 81k • written 4.8 years ago by ▴ 80
3
votes
13
replies
2.6k
views
VarScan warning and exit after Invalid format for pileup at line 1
WES software error variant calling
updated 4.9 years ago by 20 • written 5.0 years ago by ▴ 80
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