User: Baoxu

gravatar for Baoxu
Baoxu0
Reputation:
0
Status:
New User
Last seen:
19 hours ago
Joined:
4 weeks ago
Email:
1*********@qq.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by Baoxu

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
50
views
0
answers
How to define haplogroup in plant
... The haplogroup in human is often determined by snps in mitochondria. Recently I have to divide the population of a kind of plant into different types of haplogroup using the mitochondria snps. I found two references using different kinds of method in plants: one is in Arabidopsis- they use QT-clust ...
genome snp sequencing written 8 days ago by Baoxu0
0
votes
2
answers
981
views
2
answers
Comment: C: Polyploid genome and mapping !!
... Many thanks for your reply! I don't understand what you mean for the first option. Maybe I didn't explain the question well. I mapped the re-sequencing reads(100 bp pair-end) with bwa-mem (defaut parameter) for the hexaploid wheat. But I found a lot of reads which can be mapped to reference have ...
written 24 days ago by Baoxu0
0
votes
2
answers
981
views
2
answers
Answer: A: Polyploid genome and mapping !!
... Same questions! When the reference is tetraploid or hexaploid there are many duplications across the genome. Lots of reads will be Mutipul-mapped reasds. How to deal with it ? ...
written 24 days ago by Baoxu0
0
votes
1
answer
3.9k
views
1
answers
Answer: A: What Causes The Bwa Error: "Assertion `Re - Rb == Rlen' Failed."
... It seems that some of reads in fastq have some problem. I suspect the some of the reads may be too short ( < 30bp). ...
written 24 days ago by Baoxu0

Latest awards to Baoxu

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1654 users visited in the last hour