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5
votes
4
replies
1.7k
views
6 follow
bioinformatics pipelines on GCP or AWS
RNA-seq google ChIP-seq cloud
updated 18 months ago by 3.7k • written 2.0 years ago by ★ 1.4k
1
vote
1
reply
744
views
shiny apps for DEseq2, edgeR, limma
shiny limma DEseq2 edgeR
updated 21 months ago by ▴ 30 • written 21 months ago by ★ 1.4k
1
vote
1
reply
2.1k
views
heatmap of genes pseudotime in monocle3
monocle3 and monocle2
11 months ago by Bogdan ★ 1.4k
1
vote
0
replies
2.1k
views
Answer: Answer: heatmap of genes pseudotime in monoclle3
21 months ago by Bogdan ★ 1.4k
0
votes
0
replies
949
views
Comment: Comment: monocle3 and spData
23 months ago by Bogdan ★ 1.4k
0
votes
2
replies
949
views
monocle3 and spData
monocle3
23 months ago by Bogdan ★ 1.4k
0
votes
0
replies
654
views
convert monocle3 into monocle2 cds
monocle
23 months ago by Bogdan ★ 1.4k
1
vote
1
reply
400
views
scanning sequences or promoter sequences with specific motifs
motifs
updated 2.1 years ago by 21k • written 2.1 years ago by ★ 1.4k
0
votes
0
replies
834
views
Comment: Comment: batch correction in ChIp-seq data
2.1 years ago by Bogdan ★ 1.4k
0
votes
1
reply
834
views
Comment: Comment: batch correction in ChIp-seq data
2.1 years ago by Bogdan ★ 1.4k
0
votes
4
replies
834
views
batch correction in ChIp-seq data
batch ChIP-seq
updated 2.1 years ago by 12k • written 2.1 years ago by ★ 1.4k
1
vote
3
replies
884
views
extracting a gene from a gmt file
gmt pathway
updated 10 months ago by 40k • written 2.1 years ago by ★ 1.4k
0
votes
1
reply
649
views
downloading fastq files from galaxy
galaxy
updated 2.3 years ago by 13k • written 2.3 years ago by ★ 1.4k
0
votes
0
replies
517
views
about the batch correction and integration and normalization of scRNA-seq data
normalization scRNA-seq
2.4 years ago by Bogdan ★ 1.4k
6
votes
3
replies
980
views
recent Hi-C databases
hi-C 4C 3C
updated 2.4 years ago by ▴ 190 • written 2.7 years ago by ★ 1.4k
3
votes
1
reply
609
views
HI-C analysis in the cloud environment
HI-C
updated 2.5 years ago by ▴ 190 • written 2.6 years ago by ★ 1.4k
0
votes
1
reply
614
views
Forum: Apache Spark on AWS
apachespark
updated 2.5 years ago by 21k • written 2.5 years ago by ★ 1.4k
0
votes
0
replies
724
views
Comment: C: to annotate BEDPE files
2.6 years ago by Bogdan ★ 1.4k
0
votes
3
replies
724
views
to annotate BEDPE files
bedtools annotate
updated 5 days ago by ▴ 760 • written 2.6 years ago by ★ 1.4k
0
votes
0
replies
392
views
Comment: C: a simple question about file permissions
2.6 years ago by Bogdan ★ 1.4k
0
votes
2
replies
392
views
a simple question about file permissions
SLURM cluster operating system
2.6 years ago by Bogdan ★ 1.4k
0
votes
1
reply
875
views
CUT&TAG and CUT&RUN
ChIP-Seq
updated 2.7 years ago by 17k • written 2.7 years ago by ★ 1.4k
1
vote
5
replies
2.0k
views
scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics
scRNA-seq
updated 2.7 years ago by ▴ 40 • written 2.9 years ago by ★ 1.4k
0
votes
0
replies
2.0k
views
Comment: C: scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics
2.7 years ago by Bogdan ★ 1.4k
0
votes
0
replies
980
views
Comment: C: recent Hi-C databases
2.7 years ago by Bogdan ★ 1.4k
0
votes
0
replies
932
views
Comment: C: visualize RNA secondary/tertiary structure, and overlay the primary sequence
2.8 years ago by Bogdan ★ 1.4k
0
votes
1
reply
932
views
Comment: C: visualize RNA secondary/tertiary structure, and overlay the primary sequence
2.8 years ago by Bogdan ★ 1.4k
0
votes
1
reply
932
views
Comment: C: visualize RNA secondary/tertiary structure, and overlay the primary sequence
2.8 years ago by Bogdan ★ 1.4k
0
votes
6
replies
932
views
visualize RNA secondary/tertiary structure, and overlay the primary sequence
RNA RNA structure visualization
2.8 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.5k
views
Comment: C: filtering the somatic variants
2.8 years ago by Bogdan ★ 1.4k
5
votes
11
replies
4.5k
views
filtering the somatic variants
SNP snp
updated 2.8 years ago by • 0 • written 7.5 years ago by ★ 1.4k
1
vote
0
replies
2.4k
views
Answer: A: NMF tools for scRNA analysis
2.8 years ago by Bogdan ★ 1.4k
0
votes
0
replies
503
views
database of human mRNA structures
RNA
2.8 years ago by Bogdan ★ 1.4k
0
votes
0
replies
578
views
predicted structure of full-length mRNA/lincRNA
sequence structure RNA
2.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
2.0k
views
Comment: C: scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics
2.9 years ago by Bogdan ★ 1.4k
1
vote
1
reply
780
views
Answer: A: Network analysis: where to start?
2.9 years ago by Bogdan ★ 1.4k
1
vote
5
replies
519
views
GO and C++
C++ GO
updated 3.0 years ago by 8.2k • written 3.0 years ago by ★ 1.4k
0
votes
0
replies
519
views
Comment: C: GO and C++
3.0 years ago by Bogdan ★ 1.4k
0
votes
3
replies
1.6k
views
scRNA-seq data at different time points
scRNA-seq
updated 2.4 years ago by • 0 • written 3.2 years ago by ★ 1.4k
0
votes
4
replies
3.2k
views
packages for displaying heatmaps of mutations etc ...
SNP
updated 3.2 years ago by ▴ 10 • written 7.0 years ago by ★ 1.4k
0
votes
0
replies
1.6k
views
Comment: C: scRNA-seq data at different time points
3.2 years ago by Bogdan ★ 1.4k
0
votes
0
replies
3.0k
views
Comment: C: computing resources for scRNA-seq analysis
3.3 years ago by Bogdan ★ 1.4k
0
votes
1
reply
3.0k
views
Comment: C: computing resources for scRNA-seq analysis
3.3 years ago by Bogdan ★ 1.4k
0
votes
0
replies
3.0k
views
Comment: C: computing resources for scRNA-seq analysis
3.3 years ago by Bogdan ★ 1.4k
0
votes
0
replies
3.0k
views
Comment: C: computing resources for scRNA-seq analysis
3.3 years ago by Bogdan ★ 1.4k
0
votes
7
replies
3.0k
views
computing resources for scRNA-seq analysis
R sequencing scRNA-seq
3.3 years ago by Bogdan ★ 1.4k
0
votes
0
replies
5.5k
views
Comment: C: about batch correction in scRNA-seq
3.5 years ago by Bogdan ★ 1.4k
0
votes
2
replies
5.5k
views
Answer: A: about batch correction in scRNA-seq
3.5 years ago by Bogdan ★ 1.4k
21
votes
18
replies
5.5k
views
about batch correction in scRNA-seq
scRNAseq scRNA batch correction
3.5 years ago by Bogdan ★ 1.4k
18
votes
15
replies
2.4k
views
minimal free energy and RNA folding
MFE RNA
3.5 years ago by Bogdan ★ 1.4k
384 results • Page 2 of 8
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