User: gsilvaarias

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Comment: C: calculate Per variant Heterozygosity from VCF file
... Hey! Thanks. It works fine. Just a small update to use this command with a VCF file including multiallelic sites (up to four). paste <(awk -F"\t" 'BEGIN {print "CHR\tPOS\tREF\tALT"} !/^#/ {print $1"\t"$2"\t"$4"\t"$5}' file.vcf) \ <(awk 'BEGIN {print "nHet"} !/^#/ {print gsub(/0\|1|1 ...
written 6 months ago by gsilvaarias0

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