User: drragill

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Posts by drragill

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Can detection of SNP from DNA (Intronic part) and mRNA (Exonic Part) make some real differences?
... In my understanding information regarding the gene expression come from mRNA (exon) and control or regulation of a gene can get from non-coding part of DNA (intron etc.). If it is true then I have a hypothesis that SNPs from mRNA (Exonic part) can provide the information related to a trait (through ...
genome snp rna-seq written 4 days ago by drragill0 • updated 2 days ago by shawn.w.foley580
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Comment: C: Learning analysis of RNA-Seq data from assembly to final publishable
... Many thanks for your kind suggestions! ...
written 13 days ago by drragill0
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Comment: C: Learning analysis of RNA-Seq data from assembly to final publishable
... Many thanks for your kind response! ...
written 16 days ago by drragill0
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Comment: C: Learning analysis of RNA-Seq data from assembly to final publishable
... Many thanks for your kind response! ...
written 16 days ago by drragill0
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Learning analysis of RNA-Seq data from assembly to final publishable
... Hi, I am new in the field of RNA-Sequencing. I wanted to learn the RNA-Seq data analysis starts from sequencing to final publishable form. What combinations of softwares I should start learning? Please tell me from simple to complex. Thanks! ...
genome assembly alignment rna-seq written 16 days ago by drragill0 • updated 16 days ago by ATpoint17k
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Comment: C: How to Detect the Tandem repeats elements from RNA-Seq data?
... Thanks for your kind reply, yes I have a reference genome. My Species name is Brassica napus and genome already been sequenced. Actually, I found a pipeline to obtain the TE (Transposable elements) using RNA-seq data. As I read in the literature, TE produced all non-coding gene regulators such as ln ...
written 20 days ago by drragill0
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How to Detect the Tandem repeats elements from RNA-Seq data?
... Hi, I wanted to detect the Tandem repeat elements from the RNA-Seq data and then my aim to find the regulatory sequences from this. Please tell me which software I should use and also tell me if there is any such database exists. Thanks! ...
assembly alignment rna-seq written 21 days ago by drragill0

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