User: leslie.ecker

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Posts by leslie.ecker

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Error: Failed to open files
... I'm trying update my phenotypes and gender. I use the comand line bellow, but appears the error: Error: Failed to open JSB_AX001toAX011_updatepheno. I checked many times my files and I can not understand wich the problem. Please, can you help me? Many Thanks! C:\Users\leka_>plink --bfile ...
software error written 7 days ago by leslie.ecker0 • updated 7 days ago by Pierre Lindenbaum120k
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Comment: C: Help in Gwas analysis
... I really need help here, the initially generated files are not correct data of phenotype and gender (both were marked with 0 or -9) and now I need to insert / modify this data correctly, the sex and the phenotype of each sample. I do not understand how to do this. Would you help me? Thank you ...
written 9 days ago by leslie.ecker0
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Comment: C: Help in Gwas analysis
... Many thanks for help. The phenotype,gender and information exist in FAM file but I need update them. How can update this columms im FAM or PED files? tks ...
written 11 days ago by leslie.ecker0
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Comment: A: Help in Gwas analysis
... Many thanks all, your tips were useful, wonderful!! Now, I have other question about this error: A problem with line 124 in [ C:\Users\leka_\Documents\DOUTORADO\gwas\gwas\Dataset\gwas_26032019\plink_text_format\JSB_AX001toAX011_final.ped ] Expecting 6 + 2 * 920636 = 1841278 columns, but found 1455 ...
written 11 days ago by leslie.ecker0
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Help in Gwas analysis
... Hello! I'm starting gwas analysis and, actually I have quite a hard time on some points.The analysis were conduted by Affymetrix array and I have a case-control study. I have the .bed, .fam. bin, .ped, and .map files. However the files do not state which are the individuals cases and controls and a ...
gwas written 13 days ago by leslie.ecker0

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