User: salanova.elliott

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Posts by salanova.elliott

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Comment: C: Taxids from BLAST search that are not present in names.dmp or nodes.dmp
... Thanks for looking that up! Any idea why those taxids specifically are aliased? I also found that these aliases are present in the merged.dmp file included in taxdump so that should make automation fairly simple! ...
written 12 months ago by salanova.elliott0
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Taxids from BLAST search that are not present in names.dmp or nodes.dmp
... I've been trying to assign the taxonomy of some blastn hits from a locally downloaded nt database by referencing the names.dmp and nodes.dmp files included in taxdump. Everything went smoothly for almost all ~300,000 hits, except for six taxids which aren't present in the taxdump files. These taxi ...
taxonomy blast written 12 months ago by salanova.elliott0

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