User: sunnysean

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sunnysean20
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1 year ago
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Posts by sunnysean

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Shapeit2 cannot open reference panel
... Thank you! Great help! ...
written 3 months ago by sunnysean20
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Comment: C: Shapeit can't open existing file
... Thanks. It is solved. ...
written 3 months ago by sunnysean20
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Comment: C: Shapeit can't open existing file
... I meet this issue now, Did you solve it? ...
written 3 months ago by sunnysean20
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Shapeit2 cannot open reference panel
... Hi, I am trying to use shapeit2 for imputation like this: shapeit --input-bed test \ --input-map chr20.map \ --input-ref chr20.hap.gz, chr20.legend.gz, phase3.sample \ --output-max phased.haps, phased.sample But shapeit2 always return "chr20.hap.gz is impossible to o ...
gwas phasing shapeit2 written 3 months ago by sunnysean20 • updated 3 months ago by Kevin Blighe60k
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Comment: C: How to extract cell positions from pheatmap
... Thanks for your answer. I am using RStudio, where your codes seems not work very well for unknown reason. Take these codes for example: grid.lines( x = unit(c(8/ncol(data), 8/ncol(data)), "npc"), y = c(0.1, 0.9), gp = gpar(lty = 2, lwd = 3, col = "black")). The position of added line always c ...
written 12 months ago by sunnysean20
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How to extract cell positions from pheatmap
... Hi, I am trying to add points and lines to some certain cells in pheatmap image. But it is very hard to get their positions by extracting them from pheatmap object. Manually obtaining the positions with locator() or something like this is not a good way, as it cannot handle a bulk of points. Anyone ...
R written 12 months ago by sunnysean20 • updated 12 months ago by Kevin Blighe60k

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