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questions
0
votes
0
replies
440
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ICGC library information
rnaseq
3.5 years ago by
camelbbs
▴ 710
3
votes
4
replies
4.3k
views
IRES prediction tool
translation
updated 4.7 years ago by
Biostar
20 • written 7.4 years ago by
camelbbs
▴ 710
0
votes
1
reply
1.2k
views
Does MetDiff support paired-end reads input?
m6a
metdiff
metpeaks
5.9 years ago by
camelbbs
▴ 710
15
votes
6
replies
23k
views
6 follow
Normalization Method In Comparing Differential Gene Expression
rna-seq
updated 6.2 years ago by
ra2967
▴ 30 • written 12.0 years ago by
camelbbs
▴ 710
2
votes
11
replies
7.8k
views
6 follow
Error For End Coordinate When Running Cuffdiff
rna-seq
cuffdiff
updated 7.4 years ago by
Picasa
▴ 650 • written 12.0 years ago by
camelbbs
▴ 710
0
votes
0
replies
1.6k
views
how to get the binding motif of splicing factor
rna binding protein
7.6 years ago by
camelbbs
▴ 710
2
votes
1
reply
1.7k
views
SNP database in heart development or disorder
heart-development
SNP
updated 2.1 years ago by
Ram
44k • written 9.3 years ago by
camelbbs
▴ 710
1
vote
4
replies
2.6k
views
where to download genepattern zip file
genepattern
updated 7.9 years ago by
alaindomissy
▴ 160 • written 7.9 years ago by
camelbbs
▴ 710
8
votes
13
replies
3.2k
views
Number of reads in one gene affect the differential expression analysis?
RNA-Seq
DESeq
counts
DEG
RNASeq
updated 8.2 years ago by
i.sudbery
20k • written 8.2 years ago by
camelbbs
▴ 710
2
votes
5
replies
1.6k
views
Truncate RNASeq data to get similar abundance
rnaseq
8.2 years ago by
camelbbs
▴ 710
5
votes
7
replies
2.2k
views
The Number Substitute The Character
exome
seq
updated 8.4 years ago by
Biostar
20 • written 12.3 years ago by
camelbbs
▴ 710
1
vote
1
reply
1.8k
views
Do I need to consider strand information in searching microRNA binding sites ?
microRNA
8.6 years ago by
camelbbs
▴ 710
1
vote
1
reply
1.7k
views
Retrieve RNA-protein binding sites from CLIP-Seq
clip-seq rna protein binding
updated 8.7 years ago by
lsp03yjh
▴ 860 • written 8.7 years ago by
camelbbs
▴ 710
1
vote
3
replies
2.3k
views
Extract sequences from local genome file by coordinates
sequence bioperl coordinates
updated 8.7 years ago by
mastal511
★ 2.1k • written 8.7 years ago by
camelbbs
▴ 710
0
votes
0
replies
2.2k
views
sample with no replicates using GSEA
RNA-Seq
gsea
updated 2.2 years ago by
Ram
44k • written 9.1 years ago by
camelbbs
▴ 710
3
votes
1
reply
2.6k
views
Why some SNP databases don't contain the strand information
SNP
strand
updated 9.2 years ago by
Pablo
★ 1.9k • written 9.2 years ago by
camelbbs
▴ 710
7
votes
6
replies
3.7k
views
How to find the SNP in promoter regions
promoter
SNP
updated 2.0 years ago by
Ram
44k • written 9.3 years ago by
camelbbs
▴ 710
0
votes
0
replies
1.9k
views
Retrieving genomic coordinates of Transcriptional factor binding sites
transcriptional-factor
gene
updated 23 months ago by
Ram
44k • written 9.3 years ago by
camelbbs
▴ 710
6
votes
4
replies
4.0k
views
When Using Deseq Does One Need To Estimate The Size Factor And Dispersion For Each Condition?
rna-seq
updated 9.4 years ago by
Biostar
20 • written 11.8 years ago by
camelbbs
▴ 710
4
votes
4
replies
6.4k
views
Difference Between Htseq-Count And Bedtools Multicov
rna-seq
updated 9.4 years ago by
wm
▴ 560 • written 12.0 years ago by
camelbbs
▴ 710
3
votes
1
reply
2.4k
views
a question about sharing the ucsc custom track to other people
ucsc
custom-track
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
camelbbs
▴ 710
17
votes
14
replies
13k
views
10 follow
How To Merge Isoforms For A Gene
rnaseq
updated 2.6 years ago by
Ram
44k • written 11.5 years ago by
camelbbs
▴ 710
6
votes
2
replies
5.1k
views
Calculate Read Counts Rnaseq By Htseq-Count
rnaseq
updated 10.0 years ago by
Biostar
20 • written 11.5 years ago by
camelbbs
▴ 710
5
votes
7
replies
8.6k
views
Question In Normalizing With Ercc Spike-In Control
updated 10.4 years ago by
Biostar
20 • written 11.1 years ago by
camelbbs
▴ 710
4
votes
1
reply
5.5k
views
Can lncRNA be analyzed by polyA-selected RNASeq library
RNA-Seq
lncRNA
updated 3.1 years ago by
Ram
44k • written 10.5 years ago by
camelbbs
▴ 710
1
vote
9
replies
3.3k
views
Read Counts Difference From Different Tools
rnaseq
updated 10.6 years ago by
Biostar
20 • written 11.7 years ago by
camelbbs
▴ 710
7
votes
9
replies
8.3k
views
How To Add Tools Not Existed In Tool Shed To Local Galaxy
local
galaxy
updated 10.6 years ago by
Ido Tamir
5.2k • written 10.6 years ago by
camelbbs
▴ 710
2
votes
3
replies
2.6k
views
Looking For Recommendations For Commercial Arrays Designed To Study Epigenetic Changes
updated 10.6 years ago by
Xingyu Yang
▴ 280 • written 11.9 years ago by
camelbbs
▴ 710
5
votes
3
replies
4.5k
views
Which One Is Better For Constructing Transcriptome For Noncoding Region, Scripture Or Cufflinks ?
rna-seq
updated 10.7 years ago by
Biostar
20 • written 11.8 years ago by
camelbbs
▴ 710
3
votes
2
replies
5.4k
views
Display Bed In Igv
igv
updated 10.8 years ago by
Biostar
20 • written 11.9 years ago by
camelbbs
▴ 710
7
votes
6
replies
3.8k
views
A Question About Annotation To Exome Seq
exome
sequencing
updated 10.8 years ago by
Biostar
20 • written 12.3 years ago by
camelbbs
▴ 710
5
votes
2
replies
2.9k
views
Search The Protein Domain By Sequence In Batch Work
protein
domain
11.2 years ago by
camelbbs
▴ 710
4
votes
3
replies
3.7k
views
About Trim The Exome-Seq
updated 11.2 years ago by
Devon Ryan
104k • written 11.2 years ago by
camelbbs
▴ 710
2
votes
3
replies
5.1k
views
The Difference Between Rpkm And Raw Read Counts
rnaseq
updated 11.3 years ago by
Biostar
20 • written 11.8 years ago by
camelbbs
▴ 710
0
votes
2
replies
2.4k
views
A Question About Comparing Two Samples In Cufflinks
rna-seq
updated 11.3 years ago by
med.rdgmc
• 0 • written 12.0 years ago by
camelbbs
▴ 710
8
votes
12
replies
6.4k
views
Are There Publicly Available Rna-Seq Datasets From Human Adult Pancreas And Stomach?
rna-seq
updated 11.3 years ago by
Biostar
20 • written 11.8 years ago by
camelbbs
▴ 710
17
votes
10
replies
26k
views
Rna-Seq Data In Public Database
rna-seq
updated 11.3 years ago by
alaincoletta
▴ 170 • written 12.2 years ago by
camelbbs
▴ 710
1
vote
1
reply
4.3k
views
How To Display Bed12 Format In Ucsc Browser
ucsc
updated 11.3 years ago by
Ido Tamir
5.2k • written 11.3 years ago by
camelbbs
▴ 710
2
votes
3
replies
2.2k
views
How To Figure Out The Base On The Special Positions
rnaseq
snp
11.4 years ago by
camelbbs
▴ 710
7
votes
5
replies
4.8k
views
How To Remove The Intronic Reads Before Counting
rnaseq
rna-seq
updated 11.4 years ago by
Alex Reynolds
35k • written 11.4 years ago by
camelbbs
▴ 710
9
votes
6
replies
4.9k
views
Merge The Sam Files For Dexseq
sam
updated 11.4 years ago by
venks
▴ 740 • written 11.4 years ago by
camelbbs
▴ 710
15
votes
9
replies
5.0k
views
Selecting Rna Database With Polya
rnaseq
mrna
updated 11.4 years ago by
Malachi Griffith
20k • written 11.4 years ago by
camelbbs
▴ 710
3
votes
1
reply
2.9k
views
Comparing Gene Expression From Strand-Specific Library And Unstranded Library In Rnaseq
rnaseq
strand
updated 11.4 years ago by
Nicolas Rosewick
11k • written 11.4 years ago by
camelbbs
▴ 710
1
vote
5
replies
3.0k
views
Does The Ucsc Knowngenes Table Include All Types Of Rna: Coding Rna, Lncrna, Pseudogenes And Sncrna?
genes
11.4 years ago by
camelbbs
▴ 710
1
vote
3
replies
2.9k
views
Question Of Calculating Counts For Strand-Specific
rnaseq
htseq
11.5 years ago by
camelbbs
▴ 710
4
votes
8
replies
7.3k
views
Z-Score On Raw Counts
rnaseq
11.5 years ago by
camelbbs
▴ 710
5
votes
2
replies
3.5k
views
Any Database For Cds-Located Mirna Target Sites
mirna
target
updated 11.6 years ago by
Johanna Schott
▴ 400 • written 11.6 years ago by
camelbbs
▴ 710
6
votes
5
replies
6.4k
views
Get Conservation Score Of Chromosome Region
conservation
updated 11.7 years ago by
Ian
6.1k • written 11.7 years ago by
camelbbs
▴ 710
16
votes
6
replies
11k
views
Draw Heatmap Or Do Pca Analysis With Raw Read Counts?
rna-seq
updated 11.8 years ago by
Irsan
★ 7.8k • written 11.8 years ago by
camelbbs
▴ 710
1
vote
5
replies
5.1k
views
How To Find The Strand-Specific Info In The Public Data From The Illumina Human Body Map 2.0 Project
rna-seq
updated 11.8 years ago by
matted
7.8k • written 11.8 years ago by
camelbbs
▴ 710
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