User: gustavojorge080

Reputation:
0
Status:
New User
Last seen:
3 days, 15 hours ago
Joined:
3 months, 4 weeks ago
Email:
g**************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by gustavojorge080

<prev • 18 results • page 1 of 2 • next >
0
votes
0
answers
70
views
0
answers
Mira assembler has stopped working
... Hello people. I am using the Mira assembler in some iontorrent readings. Everything was going well, but suddenly the program stopped mounting the readings correctly. Example: I used the program to read "A" and it was executed. All right. So I went to assemble reading "B", but it didn't perform. Th ...
genome assembly mira bug iontorrent written 4 days ago by gustavojorge0800
0
votes
0
answers
70
views
0
answers
Run Mira Assembler with multiple kmer values
... Hello people. I am using Mira assembler, however, I want to run it with kmer values 21, 31, 55, 77, 99 and 127. Is there any way to run everything simultaneously? How does it happen with SPAdes? Thank you very much in advance! ...
kmers assembler kmer mira assembly written 10 days ago by gustavojorge0800
0
votes
0
answers
69
views
0
answers
Comment: C: Run Ray Assembler with multiple kmer values
... Oh I see. Thanks for answer :) ...
written 10 days ago by gustavojorge0800
0
votes
0
answers
69
views
0
answers
Run Ray Assembler with multiple kmer values
... Hello people. I am using Ray assembler, however, I want to run it with kmer values 21, 31, 55, 77, 99 and 127. Is there any way to run everything simultaneously? How does it happen with SPAdes? Thank you very much in advance! ...
genome assembly ray spades gene written 17 days ago by gustavojorge0800
0
votes
1
answer
233
views
1
answer
Ion Torrent vs 454, Illumina and Pacbio reads
... Which of the following formats is most similar to Ion Torrent readings? 454 IIlumina PacBio Any answer will be welcome! ...
ion torrent illumina 454 ion pacbio written 10 weeks ago by gustavojorge0800 • updated 10 weeks ago by h.mon27k
0
votes
0
answers
124
views
0
answers
Comment: C: Ray assembly on only one computer
... Ah yes, I understood, thank you for answering and helping me. ...
written 11 weeks ago by gustavojorge0800
0
votes
0
answers
124
views
0
answers
Comment: C: Ray assembly on only one computer
... Hello, thank you for replying. I'm using Ray for some tests and I know it's old. It is installed correctly. When I run the assembly with only "Ray" and the parameters it works normally. However, I wonder if this is the correct way to run it or if I should use "mpiexec -n 80" before "Ray". ...
written 11 weeks ago by gustavojorge0800
2
votes
0
answers
124
views
0
answers
Ray assembly on only one computer
... Hello guys I'd like to run an assembly with Ray This program is parallel and allows to run on more than one computer, but I want to run it on my own only. The manual suggests running it as follows: mpiexec -n 80 Ray However, the manual does not explain how the above command works. I think this c ...
assembly ray written 11 weeks ago by gustavojorge0800
0
votes
0
answers
179
views
0
answers
Comment: C: Mira assembler with IonTorrent
... This is the error that appears: Fatal error (may be due to problems of the input data or parameters): ******************************************************************************** * Problems found with the template data, see output log for more info. This points some serious problem either wit ...
written 3 months ago by gustavojorge0800 • updated 12 weeks ago by h.mon27k
2
votes
0
answers
179
views
0
answers
Mira assembler with IonTorrent
... Hello everyone! I am new to the world of assembling genomes and would like to run the Mira with IonTorrent unpaired reads. But assembly results in empty files. The first step is to create a manifest file and then run: mira manifest.conf> & log_assembly.txt Below is the manifest file: ...
assembly mira ion written 3 months ago by gustavojorge0800 • updated 12 weeks ago by Kevin630

Latest awards to gustavojorge080

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1754 users visited in the last hour