User: caro-ca

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caro-ca0
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Posts by caro-ca

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Comment: C: Blast an organism against a downloaded database
... Thank you for the reply, but unfortunately, it didn't work. ...
written 10 days ago by caro-ca0
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Comment: C: Blast an organism against a downloaded database
... Thank you so much for your response. I checked your comments: 1) gzip 1.6 2) I downloaded the .gz from a web browser. When I type file other_genomic.gz I get : other_genomic.gz: gzip compressed data, last modified: Thu May 23 04:34:35 2019, from Unix When I try to do `more other_genomic.gz ...
written 10 days ago by caro-ca0
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Blast an organism against a downloaded database
... Hi, Biostar community! I am trying to do a blastn with my genome assembled on Linux against an organism that only has one public assembled genome. The latter genome comes from the same organism but a different strand. When I ran Mummer, my genome assembly and the one that is on NCBI are quite diffe ...
ncbi blast databases nanopore written 10 days ago by caro-ca0 • updated 10 days ago by Mensur Dlakic1.3k

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