User: amandinelecerfdefer

Reputation:
0
Status:
New User
Last seen:
8 hours ago
Joined:
2 weeks, 2 days ago
Email:
a******************@orange.fr

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by amandinelecerfdefer

<prev • 25 results • page 1 of 3 • next >
0
votes
1
answer
68
views
1
answer
Problem to Read my file : infinite loop
... Hello, I have an urgent problem thinking in python. I want to read my file line by line to assign to each various function but when I read it, it only reads the first line in a loop. So I find myself in an infinite loop. How to read the whole file line by line and not just the first line? thank y ...
python infinite loop file read written 10 hours ago by amandinelecerfdefer0 • updated 8 hours ago by WouterDeCoster39k
0
votes
2
answers
901
views
2
answers
Comment: C: vector dimension limit in biomaRt
... Thank you for notifying me of your answer, I had not paid attention to this position. Thank you. I take note of your answer. ...
written 2 days ago by amandinelecerfdefer0
0
votes
0
answers
134
views
0
answers
Comment: C: BioMart : the BioMart webservice returned an invalid result
... Thank you for your suggestions, I will explore these tools to find a more suitable one and thus avoid overloading the server. ...
written 2 days ago by amandinelecerfdefer0
0
votes
2
answers
901
views
2
answers
Comment: C: vector dimension limit in biomaRt
... Hello, on the other hand, a file of 20,000 lines brings an error: 11mError in getBM(attributes = c("refsnp_id", "ensembl_gene_stable_id", "ensembl_transcript_stable_id"), : The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1. Please rep ...
written 2 days ago by amandinelecerfdefer0
0
votes
0
answers
134
views
0
answers
Comment: C: BioMart : the BioMart webservice returned an invalid result
... I only made a request for 20,000 rsID because, as Mike says, he expanded the research capacity. I have only requested a single file of 20,000 lines without making any loops, I test Mike's update. ...
written 2 days ago by amandinelecerfdefer0
0
votes
2
answers
95
views
2
answers
Comment: C: All result in one file
... Thank you, it works! ...
written 2 days ago by amandinelecerfdefer0
0
votes
0
answers
134
views
0
answers
Comment: C: BioMart : the BioMart webservice returned an invalid result
... I modified my request with the information given in the post. But a new memory error appears: Error in curl::curl_fetch_memory(url, handle = handle) : Timeout was reached: Connection time-out Calls: useMart ... request_fetch -> request_fetch.write_memory -> Exécution arrêt ...
written 2 days ago by amandinelecerfdefer0
0
votes
2
answers
95
views
2
answers
Comment: C: All result in one file
... unfortunately, I just tried your proposals, which unfortunately don't work. edit : I answer here because the site doesn't want me to comment on your answer: I want to retrieve the total output of each request and not just one item to be returned by BioMart ...
written 3 days ago by amandinelecerfdefer0
0
votes
2
answers
95
views
2
answers
Comment: C: All result in one file
... Thank you for your answer. Excuse me, I made a mistake, there is no i in my code, it's a bad habit, it's a k instead of the i. ...
written 3 days ago by amandinelecerfdefer0
1
vote
2
answers
95
views
2
answers
All result in one file
... Hello, I want to perform the Biomart request on several files in the same folder (which works). But I would like the output of the request for each file to be saved either: 1 file to its own output file (1 request = 1 file) or the output of requests for 500 files is in the same file (500 files = 1 ...
R written 3 days ago by amandinelecerfdefer0 • updated 3 days ago by SMK1.3k

Latest awards to amandinelecerfdefer

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 568 users visited in the last hour