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Answer: Answer: How to add reference as new sample to vcf?
17 months ago by Colaptes ▴ 100
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2
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1.5k
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Comment: Comment: Removing indels in VCF file
19 months ago by Colaptes ▴ 100
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5
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1.5k
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Removing indels in VCF file
bcftools
updated 9 weeks ago by ▴ 130 • written 19 months ago by ▴ 100
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405
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Mitigating reference bias in genotype calls
reference-bias genotype-calling
updated 21 months ago by 44k • written 21 months ago by ▴ 100
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2.5k
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Comment: Comment: Mapping sequencing reads to circular reference
2.1 years ago by Colaptes ▴ 100
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5
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2.5k
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Mapping sequencing reads to circular reference
circular mitogenome genome mapping
updated 2.1 years ago by • 0 • written 2.1 years ago by ▴ 100
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0
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712
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Comment: Comment: Concatenate multifastas
3.5 years ago by Colaptes ▴ 100
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2
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712
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Concatenate multifastas
join fasta concatenate multifasta
3.5 years ago by Colaptes ▴ 100
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2.8k
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Comment: Comment: if you annotate a vcf with snpeff, how do you know if the annotation are referri
3.6 years ago by Colaptes ▴ 100
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1.4k
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Comment: Comment: Sequence divergence of whole genomes
3.6 years ago by Colaptes ▴ 100
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2
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1.4k
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Sequence divergence of whole genomes
alignment divergence
3.6 years ago by Colaptes ▴ 100
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1.4k
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Answer: Answer: Merging two linux files based on same rows
3.6 years ago by Colaptes ▴ 100
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692
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Answer: Answer: Chosing a phylogenetic tree construction method
3.6 years ago by Colaptes ▴ 100
2
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1.2k
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Answer: A: Need tool for Convert vcf into fa
updated 5.1 years ago by 12k • written 5.2 years ago by ▴ 100
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1
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1.8k
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Comment: C: Maker2 Transcriptome Input
5.2 years ago by Colaptes ▴ 100
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1.8k
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Comment: C: Maker2 Transcriptome Input
5.2 years ago by Colaptes ▴ 100
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6
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1.8k
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Maker2 Transcriptome Input
Maker2 Annotation Trinity Transcriptome
5.2 years ago by Colaptes ▴ 100
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1.9k
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Comment: C: Building gene trees
5.2 years ago by Colaptes ▴ 100
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2
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1.9k
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Building gene trees
Bucky Astral Gene tree Species Tree
updated 5.2 years ago by ★ 3.8k • written 5.2 years ago by ▴ 100
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5.4k
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Comment: C: RepBase alternative for maker?
5.3 years ago by Colaptes ▴ 100
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1
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5.4k
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Comment: C: RepBase alternative for maker?
5.3 years ago by Colaptes ▴ 100
2
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1
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5.4k
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Comment: C: RepBase alternative for maker?
5.3 years ago by Colaptes ▴ 100
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8
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5.4k
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RepBase alternative for maker?
genome annotation RepBase Maker
updated 5.3 years ago by 8.3k • written 5.3 years ago by ▴ 100
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4.8k
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Comment: C: mDust location for running MITE-Hunter
5.5 years ago by Colaptes ▴ 100
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3.4k
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Answer: A: MITE hunter stops after step 2
5.5 years ago by Colaptes ▴ 100
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