User: qinghong

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qinghong0
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Posts by qinghong

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SNP calling with de novo assembly
... I am new to SNP. I am looking for some help. My PI suggested me to call snps with de novo assembly . I have 100 bacteria draft assembly (each assembly has multiplex contigs). Should I use mummer (nucmer) to align each draft genome to the reference, call the SNP. After that combine all the snps into ...
snp written 13 days ago by qinghong0 • updated 6 days ago by Vitis2.1k

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