User: SpamChop

gravatar for SpamChop
SpamChop10
Reputation:
10
Status:
New User
Location:
Edinburgh, UK
Last seen:
1 year, 4 months ago
Joined:
1 year, 5 months ago
Email:
n*********@gmail.com

Posts by SpamChop

<prev • 5 results • page 1 of 1 • next >
0
votes
0
answers
282
views
0
answers
Comment: C: using wnd charm
... Install location (most probably): downloads/wnd-charm-master and images are taken from desktop/cho ...
written 17 months ago by SpamChop10
0
votes
0
answers
282
views
0
answers
Comment: C: using wnd charm
... The GitHub page just gave the installation instructions. I dont know what to do now. I have tried basic some commands like: wndcharm train desktop/cho feature_file It says 'wndcharm' command not found. I could not find a proper implementation of wnd-charm :(. Thanks! ...
written 17 months ago by SpamChop10
0
votes
0
answers
282
views
0
answers
using wnd charm
... Hi! I have just installed wnd-charm on my mac and I am struggling with implementing it on some test images. In short: I dont know where/how to start. Anybody who has previous experience with wnd-charm or similar tool, please help! Thanks! ...
image analysis microscopy terminal wnd-charm written 17 months ago by SpamChop10
0
votes
1
answer
507
views
1
answer
Viewing alignment from SAM/MAF/PSL files
... Hi! I have an alignment file in different formats namely, SAM, MAF, PSL. These files contains data in the form of contigs mapping start and end position on chromosome, the chromosome number and score. Is there any tool for the easy visualization of this data, as in, contigs overlapping with the re ...
genome assembly alignment written 17 months ago by SpamChop10 • updated 17 months ago by h.mon31k
7
votes
3
answers
973
views
8 follow
3
answers
Mapping contigs to a reference genome
... Hi! I have ~163000 contigs (a single FASTA file) and I want to map them to a refernce genome (also a FASTA file). Is there any way to do it? I have tried bowtie2, but could not work out its nuances. Any help appreciated! Thanks ...
genome alignment written 17 months ago by SpamChop10 • updated 17 months ago by evelyn110

Latest awards to SpamChop

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1615 users visited in the last hour