User: jahanshanzida

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Posts by jahanshanzida

<prev • 16 results • page 2 of 2 • next >
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Comment: C: Novel peptide identification
... Thank you so much for the reply and consideration of my problem. ...
written 15 months ago by jahanshanzida0
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Comment: C: Novel peptide identification
... Dear manuel.belmadani, Thank you so much for your elaborate explanation. You were right . My peptides are very short . Your suggestions are very helpful. I hope will get some fruitful outcome by following these. Thanks for your time. Shanzida ...
written 15 months ago by jahanshanzida0
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Comment: C: PRIDE Mass-Spec Published data analysis?
... Hello, I have peptide 30,000 peptide sequences from human brain sample. I want to compare these peptides with the PRIDE database peptide sequence to see whether my peptide sequence is novel or not. I am facing two problems. Firstly, I have to download the pride dataset in Linux server because my c ...
written 15 months ago by jahanshanzida0
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Comment: C: Novel peptide identification
... Thank you so much for your reply. The length of my peptide sequences is 30,000, and it is very difficult to do these at the same time. I also tried to do a search by splitting but that also increases the rate of mistakes. That's why I tried to download peptide dataset in the Linux server and then co ...
written 15 months ago by jahanshanzida0
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Novel peptide identification
... Hello, I have peptide 30,000 peptide sequences from human brain sample. I want to compare these peptides with the PRIDE database peptide sequence to see whether my peptide sequence is novel or not. I am facing two problems. Firstly, I have to download the pride dataset in Linux server because my c ...
R written 15 months ago by jahanshanzida0
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Comment: A: Match peptides to protein sequences and tell the position in R
... Hello, I have peptide 30,000 peptide sequences from human brain sample. I want to compare these peptides with the PRIDE database peptide sequence to see whether my peptide sequence is novel or not. I am facing two problems. Firstly, I have to download the pride dataset in Linux server because my c ...
written 15 months ago by jahanshanzida0

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