User: Elephantdumbo

gravatar for Elephantdumbo
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1 day, 22 hours ago
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2 weeks, 2 days ago
Email:
s****@u.rochester.edu

Posts by Elephantdumbo

<prev • 14 results • page 1 of 2 • next >
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Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
... what problems are you having with fastq-dump ? it works well on WSL in the insider preview windows version ...
written 10 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... oh Thanks. I ran the brew audit --strict --online and i got no errors and when i ran your brew audit --new-formula i got the github not notable error, but people on brew github said to ignore it, and the installed formula work as intended. I am set like this right ? However sometimes i get this erro ...
written 14 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... I was able to install the formula with no error but when i audit i get this 1 error. why cant i put .R in the bin ? I modified my main bash script to look for them there and it works. . How can i get the path of the rest of the files then ? I cant seem to find a good idea to link the main bash scr ...
written 14 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... so i was able to deal with the errors i guess and it now installs and work correctly, but i have a question. When i release new updates to my tool in the future how will i update the formula on hombrew itself do i have to do a pull request every time ? I am confused about this process ...
written 14 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... so now I am confused. Is the problem in my formula or the command i run with ? ...
written 14 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... oh. this is the file. it only produce it when i use brew install without interactive mode 2019-07-07 01:38:38 -0400 ./configure --disable-debug --disable-dependency-tracking --disable-silent-rules --prefix=/home/linuxbrew/.linuxbrew/Cellar/repeat-test/1.1 HOMEBREW_VERSION: 2.1.6-44-g895467a ORIG ...
written 14 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... does my gzip need to have something special ? I just have my subscripts and the bash file that runs the pipeline ? ...
written 15 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... so i am getting this [message][1]. I dont really understand. What does that mean ? I also cant find a README as the cookbook suggests. Also why didnt it add the tool to my $PATH [1]:https://ibb.co/mtrt2Hp ...
written 15 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... Thank you so much. ...
written 15 days ago by Elephantdumbo20
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Comment: C: How to get my tool on Homebrew ?
... so I have a question now. My pipeline uses some packages from r. How can i install it using the formula code ? can brew install these r packages as a dependency ? ...
written 15 days ago by Elephantdumbo20

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