User: lykosherdshep

gravatar for lykosherdshep
lykosherdshep100
Reputation:
100
Status:
Trusted
Location:
Last seen:
1 day, 15 hours ago
Joined:
1 year, 3 months ago
Email:
l************@gmail.com

Posts by lykosherdshep

<prev • 32 results • page 2 of 4 • next >
0
votes
1
answer
3.5k
views
1
answers
Comment: C: Add annotation color bar to ggplot objects
... Thanks you very much. I'll study the package ComplexHeatmap ...
written 13 months ago by lykosherdshep100
0
votes
1
answer
3.5k
views
1
answers
Comment: C: Add annotation color bar to ggplot objects
... I don't have the contact of the author, I'll try the ComplexHeatmap, Thanks!!! ...
written 13 months ago by lykosherdshep100
0
votes
1
answer
3.5k
views
1
answers
Comment: C: Add annotation color bar to ggplot objects
... Thanks for your reply, I'm read the reference manual for Complexheatmap to see if it can help me to make such figure. I have heard that I can use cowplot package to make it, Can it be a workable solution? ...
written 13 months ago by lykosherdshep100
0
votes
1
answer
3.5k
views
1
answers
Comment: C: Add annotation color bar to ggplot objects
... Sorry for my blurred question, the picture is from paper https://www.ncbi.nlm.nih.gov/pubmed/29420467 there is a similar question here https://www.biostars.org/p/290550/, but the answer is for a heatmap object, I want a way to add a annotation color bar in a ggplot object I have write some code li ...
written 13 months ago by lykosherdshep100 • updated 13 months ago by Kevin Blighe66k
9
votes
1
answer
3.5k
views
6 follow
1
answer
Add annotation color bar to ggplot objects
... there is a picture below, I want to use my data to create a similar plot like it, but I don't know how to add annotation color bar for it! ![color bar in the red circle][2] [2]: https://i.imgur.com/ahhO5zo.jpg ...
R ggplot written 13 months ago by lykosherdshep100
0
votes
2
answers
5.0k
views
2
answers
Comment: C: Add annotation color bar to ggplot or ggvis barplot
... Did you find some good methods? I have met the same question ...
written 13 months ago by lykosherdshep100
0
votes
0
answers
655
views
0
answers
Comment: A: How to acquire the mature miRNA data from TCGA
... Or if there are another method? ...
written 14 months ago by lykosherdshep100
1
vote
0
answers
655
views
0
answers
How to acquire the mature miRNA data from TCGA
... Hello! I have some questions about the data from TCGA(experimental.strategy = "miRNA-Seq"), there are two data types "miRNA Expression Quantification" and "Isoform Expression Quantification". I have read GDC data user guide which says that The former contains summed expression for all reads aligned ...
tcga rna-seq mirna written 14 months ago by lykosherdshep100
0
votes
0
answers
1.3k
views
0
answers
Comment: C: SVA Input: Should SVs be calculated on normalized data?
... I'm meeting the seem question, you can have a look at https://www.bioconductor.org/packages/release/workflows/vignettes/rnaseqGene/inst/doc/rnaseqGene.html#pre-filtering-the-dataset where sva input takes a normalized counts through counts(data, normalized = T) ...
written 14 months ago by lykosherdshep100
0
votes
0
answers
602
views
0
answers
Comment: C: How to import RSEM expected_count data in ucsc to a deseq2 object ?
... Thanks for your recommendation, I find another way in rsem official site-"ebseq" package, I'll try the both. ...
written 14 months ago by lykosherdshep100

Latest awards to lykosherdshep

Appreciated 4 weeks ago, created a post with more than 5 votes. For A: Add annotation color bar to ggplot objects
Popular Question 9 months ago, created a question with more than 1,000 views. For Add annotation color bar to ggplot objects
Teacher 13 months ago, created an answer with at least 3 up-votes. For A: Add annotation color bar to ggplot objects
Supporter 14 months ago, voted at least 25 times.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1722 users visited in the last hour