Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
739
views
Answer: Answer: Access to fastq files on SRA Run browser
6 months ago by xiaoguang ▴ 140
0
votes
0
replies
389
views
Answer: Answer: Bar plot in R
6 months ago by xiaoguang ▴ 140
1
vote
0
replies
888
views
Answer: Answer: Importance of Data Structures for Bioinformatics?
7 months ago by xiaoguang ▴ 140
0
votes
0
replies
485
views
Answer: Answer: How to find positions with higher depth relative to their surroundings
7 months ago by xiaoguang ▴ 140
0
votes
1
reply
1.7k
views
Comment: Comment: how to calculate BAF and LRR from VCF or BCF files?
7 months ago by xiaoguang ▴ 140
0
votes
4
replies
1.7k
views
how to calculate BAF and LRR from VCF or BCF files?
SNP BAF LRR Variation
updated 5 months ago by • 0 • written 2.5 years ago by ▴ 140
0
votes
0
replies
2.3k
views
Answer: Answer: structural comparison with TM score
9 months ago by xiaoguang ▴ 140
1
vote
0
replies
2.8k
views
Answer: Answer: BAM to Fastq
2.3 years ago by xiaoguang ▴ 140
0
votes
2
replies
1.3k
views
Comment: Comment: GATK command for mutect2
2.3 years ago by xiaoguang ▴ 140
0
votes
0
replies
637
views
Get Allele specific copy number regions from WGS data using ASCAT?
CNV ASCAT specific Allele WGS
2.5 years ago by xiaoguang ▴ 140
0
votes
0
replies
1.1k
views
Comment: Comment: Do we need to filter out the 0 counts sgRNA in CRISPR analysis?
2.5 years ago by xiaoguang ▴ 140
1
vote
0
replies
3.8k
views
Comment: Comment: What files (fasta, GTF) do I need for RNA seq analysis
2.5 years ago by xiaoguang ▴ 140
0
votes
1
reply
1.1k
views
Answer: Answer: Do we need to filter out the 0 counts sgRNA in CRISPR analysis?
2.5 years ago by xiaoguang ▴ 140
0
votes
0
replies
1.5k
views
Answer: Answer: How to retrieve KO IDs for a list of genes?
2.7 years ago by xiaoguang ▴ 140
0
votes
0
replies
3.5k
views
Answer: Answer: How do I detect deletions?
2.7 years ago by xiaoguang ▴ 140
0
votes
1
reply
1.6k
views
Comment: C: Differential analysis isoform level or gene level ?
3.4 years ago by xiaoguang ▴ 140
0
votes
0
replies
853
views
Comment: C: how to get the geneNames or bedfile from fasta sequences
3.4 years ago by xiaoguang ▴ 140
0
votes
0
replies
853
views
Comment: C: how to get the geneNames or bedfile from fasta sequences
3.4 years ago by xiaoguang ▴ 140
1
vote
1
reply
853
views
Comment: C: how to get the geneNames or bedfile from fasta sequences
3.4 years ago by xiaoguang ▴ 140
1
vote
0
replies
1.4k
views
Comment: C: Filtering BAM files efficiently
3.4 years ago by xiaoguang ▴ 140
0
votes
1
reply
1.6k
views
Comment: C: Differential analysis isoform level or gene level ?
3.4 years ago by xiaoguang ▴ 140
1
vote
0
replies
1.0k
views
Answer: A: How to count the number of alignments in a bam file without using samtools?
3.4 years ago by xiaoguang ▴ 140
0
votes
1
reply
853
views
Answer: A: how to get the geneNames or bedfile from fasta sequences
3.4 years ago by xiaoguang ▴ 140
2
votes
1
reply
1.9k
views
Can I use the SCENIC package to analyze the transcription factors in the bulk RNAseq data?
rna-seq SCENIC
updated 4.0 years ago by 12k • written 4.0 years ago by ▴ 140
0
votes
0
replies
5.6k
views
Comment: C: Open Source Mass Spec Search Engines?
4.0 years ago by xiaoguang ▴ 140
5
votes
4
replies
4.4k
views
How to understand the multi-sample processing of Seurat?
RNA-Seq scRNAseq seurat
updated 4.1 years ago by 8.9k • written 4.1 years ago by ▴ 140
1
vote
1
reply
802
views
how to plot this picture?
R circos
4.1 years ago by xiaoguang ▴ 140
0
votes
0
replies
841
views
Comment: C: When using monocle3 to calculate the pseudo time of 170,000 cells, an error is r
4.3 years ago by xiaoguang ▴ 140
0
votes
2
replies
841
views
When using monocle3 to calculate the pseudo time of 170,000 cells, an error is reported, and the error is *** caught segfault *** address 0x2b3ae695f…
scRNA
4.3 years ago by xiaoguang ▴ 140
0
votes
0
replies
2.0k
views
How to calculate pseudo time for all cells with monocle3
scRNAseq monocle3
4.4 years ago by xiaoguang ▴ 140
1
vote
3
replies
1.6k
views
How to get an exact match from the bam alignment file
bam bwa samtools
updated 4.6 years ago by ▴ 20 • written 4.7 years ago by ▴ 140
4
votes
5
replies
3.2k
views
how to caculate effective length for RNA sequencing?
rna-seq RNA-Seq R
updated 4.7 years ago by ★ 7.0k • written 4.8 years ago by ▴ 140
22
votes
15
replies
11k
views
6 follow
How to normalized TPM with TMM method?
rna-seq edgeR TPM TMM
updated 2.1 years ago by ▴ 10 • written 4.8 years ago by ▴ 140
0
votes
2
replies
3.2k
views
Comment: C: how to caculate effective length for RNA sequencing?
4.8 years ago by xiaoguang ▴ 140
0
votes
0
replies
3.1k
views
Comment: C: proj_api.h not found in standard or given locations
4.8 years ago by xiaoguang ▴ 140
1
vote
2
replies
3.1k
views
proj_api.h not found in standard or given locations
R miniconda
updated 4.8 years ago by 11k • written 4.8 years ago by ▴ 140
36 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6