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Showing :
questions
0
votes
4
replies
1.7k
views
how to calculate BAF and LRR from VCF or BCF files?
SNP
BAF
LRR
Variation
updated 5 months ago by
Nick
• 0 • written 2.5 years ago by
xiaoguang
▴ 140
0
votes
0
replies
643
views
Get Allele specific copy number regions from WGS data using ASCAT?
CNV
ASCAT
specific
Allele
WGS
2.5 years ago by
xiaoguang
▴ 140
2
votes
1
reply
1.9k
views
Can I use the SCENIC package to analyze the transcription factors in the bulk RNAseq data?
rna-seq
SCENIC
updated 4.0 years ago by
GouthamAtla
12k • written 4.0 years ago by
xiaoguang
▴ 140
5
votes
4
replies
4.4k
views
How to understand the multi-sample processing of Seurat?
RNA-Seq
scRNAseq
seurat
updated 4.1 years ago by
Friederike
8.9k • written 4.1 years ago by
xiaoguang
▴ 140
1
vote
1
reply
803
views
how to plot this picture?
R
circos
4.1 years ago by
xiaoguang
▴ 140
0
votes
2
replies
847
views
When using monocle3 to calculate the pseudo time of 170,000 cells, an error is reported, and the error is *** caught segfault *** address 0x2b3ae695f…
scRNA
4.3 years ago by
xiaoguang
▴ 140
0
votes
0
replies
2.0k
views
How to calculate pseudo time for all cells with monocle3
scRNAseq
monocle3
4.4 years ago by
xiaoguang
▴ 140
1
vote
3
replies
1.7k
views
How to get an exact match from the bam alignment file
bam
bwa
samtools
updated 4.7 years ago by
yasokannan93
▴ 20 • written 4.8 years ago by
xiaoguang
▴ 140
4
votes
5
replies
3.2k
views
how to caculate effective length for RNA sequencing?
rna-seq
RNA-Seq
R
updated 4.7 years ago by
Gordon Smyth
★ 7.0k • written 4.8 years ago by
xiaoguang
▴ 140
22
votes
15
replies
12k
views
6 follow
How to normalized TPM with TMM method?
rna-seq
edgeR
TPM
TMM
updated 2.1 years ago by
DS
▴ 10 • written 4.8 years ago by
xiaoguang
▴ 140
1
vote
2
replies
3.1k
views
proj_api.h not found in standard or given locations
R
miniconda
updated 4.8 years ago by
zx8754
11k • written 4.8 years ago by
xiaoguang
▴ 140
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