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Posts by szymanski.wit
... You want to study each patient separately? Because without any replications, replicates etc. Perseus will not give you any meaningful p-values. If you take all T samples and all N samples, then you have 4 replicates and then Perseus will provide you p-values. If you want to study each patient sep ...
... You should get the rations of T/N for each pair and then proceed with the data like with the SILAC dataset. Check here: https://www.zmbh.uni-heidelberg.de/Central_Services/Mass_Spectrometry/PDF/150206%20Perseus%188.8.131.52%20Tutorial_Version2.pdf In short. when you have ratios for different replicate ...
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